R-oxynitrile lyase isoenzyme 1 precursor - Prunus dulcis (Almond)

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Unreviewed, UniProtKB/TrEMBL Q945K2 (Q945K2_PRUDU)

Last modified June 16, 2009. Version 37. History...

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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information

Names and origin

Protein names

Submitted name:
R-oxynitrile lyase isoenzyme 1 EMBL AAL11514.1

Gene names

Name:

hnl1 EMBL AAL11514.1

Organism

Prunus dulcis (Almond) (Prunus amygdalus) EMBL AAL11514.1

Taxonomic identifier

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids I › Rosales › Rosaceae › Amygdaloideae › Prunus

Protein attributes

Sequence length	563 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at protein level.

General annotation (Comments)

Cofactor	FAD By similarity. RuleBase RU003968V0
Sequence similarities	Belongs to the GMC oxidoreductase family. RuleBase RU003968V0

Ontologies

Keywords
Domain	Signal
Ligand	Flavoprotein RuleBase RU003968V0
Molecular function	Lyase
Gene Ontology (GO)
Biological process	cellular alcohol metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	FAD binding Inferred from electronic annotation. Source: InterPro lyase activity Inferred from electronic annotation. Source: UniProtKB-KW oxidoreductase activity, acting on CH-OH group of donors Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

Feature key

Position(s)

Length

Description

Graphical view

Feature identifier

Molecule processing

Signal peptide

27

Potential EMBL AAL11514.1

Chain

536

Potential EMBL AAL11514.1

PRO_5000061321

Sequences

Sequence

Length

Mass (Da)

Tools

Q945K2-1 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: E0F53C236F4B001C
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563

61,158

        10         20         30         40         50         60 
MEKSTMSAIL LVLYIFVLHL QYSEVHSLAT TSDHDFSYLS FAYDATDLEL EGSYDYVIVG 

        70         80         90        100        110        120 
GGTSGCPLAA TLSEKYKVLV LERGSLPTAY PNVLTADGFV YNLQQEDDGK TPVERFVSED 

       130        140        150        160        170        180 
GIDNVRGRVL GGTSIINAGV YARANTSIYS ASGVDWDMDL VNQTYEWVED TIVYKPNSQS 

       190        200        210        220        230        240 
WQSVTKTAFL EAGVHPNHGF SLDHEEGTRI TGSTFDNKGT RHAADELLNK GNSNNLRVGV 

       250        260        270        280        290        300 
HASVEKIIFS NAPGLTATGV IYRDSNGTPH QAFVRSKGEV IVSAGTIGTP QLLLLSGVGP 

       310        320        330        340        350        360 
ESYLSSLNIP VVLSHPYVGQ FLHDNPRNFI NILPPNPIEP TIVTVLGISN DFYQCSFSSL 

       370        380        390        400        410        420 
PFTTPPFGFF PSASYPLPNS TFAHFASKVA GPLSYGSLTL KSSSNVRVSP NVKFNYYSNL 

       430        440        450        460        470        480 
TDLSHCVSGM KKIGELLSTD ALKPYKVEDL PGVEGFNILG IPLPKDQTDD AAFETFCRES 

       490        500        510        520        530        540 
VASYWHYHGG CLVGKVLDGD FRVTGINALR VVDGSTFPYT PASHPQGFYL MLGRYVGIKI 

       550        560 
LQERSASDLK ILDSLKSAAS LVL

References

[1]	"The hydroxynitrile lyase from almond: a lyase that looks like an oxidoreductase." Dreveny I., Gruber K., Glieder A., Thompson A., Kratky C. Structure 9:803-815(2001) [PubMed: 11566130] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Seed EMBL AAL11514.1.
[2]	Glieder A.S., Dreveny I., Mandl H., Majer S., Schwab H. Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Tissue: Seed EMBL AAL11514.1.

Cross-references

Sequence databases

AF412329 Genomic DNA. Translation: AAL11514.1.

3D structure databases

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1JU2	X-ray	1.47	A/B	28-563	[»]
3GDN	X-ray	1.67	A/B	28-548	[»]
3GDP	X-ray	1.57	A/B	28-548	[»]

ModBase

Enzyme and pathway databases

BRENDA

4.1.2.10. 1961.

Family and domain databases

InterPro

IPR012132. GMC_OxRdtase.
IPR000172. GMC_OxRdtase_N.
IPR007867. GMC_OxRtase_C.
[Graphical view]

Pfam

PF05199. GMC_oxred_C. 1 hit.
PF00732. GMC_oxred_N. 1 hit.
[Graphical view]

PIRSF

PIRSF000137. Alcohol_oxidase. 1 hit.

PROSITE

PS00623. GMC_OXRED_1. 1 hit.
PS00624. GMC_OXRED_2. 1 hit.
[Graphical view]

ProtoNet

Entry information

Entry name

Q945K2_PRUDU

Accession

Primary (citable) accession number: Q945K2

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	June 16, 2009
This is version 37 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information