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Protein
Submitted name:

COS2.3

Gene
N/A
Organism
Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
COS2.3Imported
OrganismiCiona intestinalis (Transparent sea squirt) (Ascidia intestinalis)Imported
Taxonomic identifieri7719 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataTunicataAscidiaceaEnterogonaPhlebobranchiaCionidaeCiona

Interactioni

Protein-protein interaction databases

STRINGi7719.ENSCINP00000012393.

Structurei

3D structure databases

ProteinModelPortaliQ94433.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini9 – 266258WD_REPEATS_REGIONInterPro annotationAdd
BLAST

Keywords - Domaini

RepeatSAAS annotation, WD repeatSAAS annotation

Phylogenomic databases

eggNOGiKOG1274. Eukaryota.
ENOG410XSJV. LUCA.
HOGENOMiHOG000015160.
HOVERGENiHBG074190.
KOiK11274.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR024977. Apc4_WD40_dom.
IPR009071. HMG_box_dom.
IPR022100. Mcl1_mid.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF12894. ANAPC4_WD40. 1 hit.
PF12341. Mcl1_mid. 1 hit.
PF00400. WD40. 2 hits.
[Graphical view]
SMARTiSM00320. WD40. 5 hits.
[Graphical view]
SUPFAMiSSF47095. SSF47095. 1 hit.
SSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q94433-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNSKPSFRY GHSEGRTEVC YDHSGKHLVS CGFDGNVKIW KSIKDDNPTN
60 70 80 90 100
IKAGERVYSV GIKGKTLFSA SDENSVDKFS FPDGSPDGCL VRFTGTVTHL
110 120 130 140 150
SVSESRKLVA AGSSDFDIKT IDVETGKQKS YLGHQAPILS VAVDPMDEYL
160 170 180 190 200
ASSSCDGNLK IWTLKDAKCV KTLPIIGRSN DVGNSQTLSK ISWRPVTGED
210 220 230 240 250
IAVPTETGVK IFNRVTWVLL QTLTSDVTST AYQCCSFSQC GRFLASASAD
260 270 280 290 300
GWIVVWDTET QLTVRKIQHP LKSCISSIAW NPQQNNCVAF SDTRGQIGVL
310 320 330 340 350
EDVVESEEPT KPRRDEDDLD ALFDEEDDNM MVDMMADEDD KPQVILKYLK
360 370 380 390 400
PFLYLSPIPC TLDVFTTDTD VDLAPPTILP SLPIETKYTL DDDASSVATA
410 420 430 440 450
TVTAPTNFQP SSMQPPFQPT STPTHLSHRF MVWNAVGVIR SYTDVTESAI
460 470 480 490 500
DVEFHDTQTH HALHLPNHDQ YTMADLSVQA VVLAAESSVD AASKLKCVHF
510 520 530 540 550
SSWDNNKEWV IEMPDGEEIQ AVTTGDGWIA VCTDALQVRF FTLGGIQRQI
560 570 580 590 600
LSIPGNVVAM AASMDQLLVA YHITQGFGKN QCLGFMLLEV GVSSGSKPRS
610 620 630 640 650
IVGGSPLPIS QASKLEWVGF TAEGTPATVD TLGVVRMMNR SFCQTWTTVV
660 670 680 690 700
KLKSITKSRH DHCWVVGLHE NPQQIRYIQC KGSIYPSTLP RPTMAVAHYK
710 720 730 740 750
IPLCEPESDK GKYEEEYWRT KIFSSHREYL TSRGYETDGG EKQKSDLVVQ
760 770 780 790 800
QTLMRLFALC CKSDAEYQAF DVCSMMPSSA SMSLAIKYSS RIRKIMLAQR
810 820 830 840 850
LSEEAILKQQ RKVMQMVESD DEEEEEDFRT ELQSGYSAAE TEWSSQKSTR
860 870 880 890 900
KPTSSRPADV DNDDDDVMGQ STLFSTKLNL TSTPKPKKTS QRSKLDVNEE
910 920 930 940 950
EEVQVLQEKP TATDNEEVPR VISGVQLFLE EHLQSIEEQH PDLDGIEVRK
960 970
IGIKQFRALP AEEKQVKSFF SCRF
Length:974
Mass (Da):108,355
Last modified:November 1, 1998 - v2
Checksum:i0571389E922876E7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z79640 Genomic DNA. Translation: CAB01922.1.
RefSeqiNP_001123566.1. NM_001130094.2.
UniGeneiCin.34035.

Genome annotation databases

GeneIDi100170635.
KEGGicin:100170635.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z79640 Genomic DNA. Translation: CAB01922.1.
RefSeqiNP_001123566.1. NM_001130094.2.
UniGeneiCin.34035.

3D structure databases

ProteinModelPortaliQ94433.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7719.ENSCINP00000012393.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi100170635.
KEGGicin:100170635.

Organism-specific databases

CTDi11169.

Phylogenomic databases

eggNOGiKOG1274. Eukaryota.
ENOG410XSJV. LUCA.
HOGENOMiHOG000015160.
HOVERGENiHBG074190.
KOiK11274.

Family and domain databases

Gene3Di2.130.10.10. 1 hit.
InterProiIPR024977. Apc4_WD40_dom.
IPR009071. HMG_box_dom.
IPR022100. Mcl1_mid.
IPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR019775. WD40_repeat_CS.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF12894. ANAPC4_WD40. 1 hit.
PF12341. Mcl1_mid. 1 hit.
PF00400. WD40. 2 hits.
[Graphical view]
SMARTiSM00320. WD40. 5 hits.
[Graphical view]
SUPFAMiSSF47095. SSF47095. 1 hit.
SSF50978. SSF50978. 1 hit.
PROSITEiPS00678. WD_REPEATS_1. 1 hit.
PS50082. WD_REPEATS_2. 3 hits.
PS50294. WD_REPEATS_REGION. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ94433_CIOIN
AccessioniPrimary (citable) accession number: Q94433
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: November 1, 1998
Last modified: September 7, 2016
This is version 84 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.