Reviewed, UniProtKB/Swiss-Prot Q943E7 (HS16C_ORYSJ)

Names and origin

Protein names

Recommended name:
    16.9 kDa class I heat shock protein 3
Alternative name(s):
    16.9 kDa heat shock protein 3
      Short name=OsHsp16.9C

Gene names

Name:	HSP16.9C
Ordered Locus Names:	Os01g0136000, LOC_Os01g04360
ORF Names:	P0443D08.3, OsJ_00278

Organism

Oryza sativa subsp. japonica (Rice)

Taxonomic identifier

39947 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza

Protein attributes

Sequence length	149 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at transcript level.

General annotation (Comments)

Subunit structure	May form oligomeric structures.
Subcellular location	Cytoplasm Potential.
Induction	By heat shock. Ref.6
Sequence similarities	Belongs to the small heat shock protein (HSP20) family.

Ontologies

Keywords
Biological process	Stress response
Cellular component	Cytoplasm
Gene Ontology (GO)
Biological process	response to heat Ref.6 Inferred from expression pattern. Source: UniProtKB
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 149	149	16.9 kDa class I heat shock protein 3		PRO_0000233693
Experimental info
	Sequence conflict	24	1	F → L in AAB39856. Ref.1
	Sequence conflict	138	1	K → N in AAB39856. Ref.1

Sequences

	Sequence		Length	Mass (Da)
	Q943E7-1 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 5CBA401C8051924B	FASTA	149	16,904
	10 20 30 40 50 60 MSLVRRSNVF DPFADFWDPF DGVFRSLVPA TSDRDTAAFA NARVDWKETP ESHVFKADLP 70 80 90 100 110 120 GVKKEEVKVE VEEGNVLVIS GQRSKEKEDK NDKWHRVERS SGQFMRRFRL PENAKVDQVK 130 140 ASMENGVLTV TVPKAEVKKP EVKAIEISG

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	Huang C.-Y., Guan J.-C., Lin C.-Y. Submitted (DEC-1996) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA]. Strain: cv. Tainung 67.
[2]	"The genome sequence and structure of rice chromosome 1." Sasaki T., Matsumoto T., Yamamoto K., Sakata K., Baba T., Katayose Y., Wu J., Niimura Y., Cheng Z., Nagamura Y., Antonio B.A., Kanamori H., Hosokawa S., Masukawa M., Arikawa K., Chiden Y., Hayashi M., Okamoto M. , Ando T., Aoki H., Arita K., Hamada M., Harada C., Hijishita S., Honda M., Ichikawa Y., Idonuma A., Iijima M., Ikeda M., Ikeno M., Ito S., Ito T., Ito Y., Ito Y., Iwabuchi A., Kamiya K., Karasawa W., Katagiri S., Kikuta A., Kobayashi N., Kono I., Machita K., Maehara T., Mizuno H., Mizubayashi T., Mukai Y., Nagasaki H., Nakashima M., Nakama Y., Nakamichi Y., Nakamura M., Namiki N., Negishi M., Ohta I., Ono N., Saji S., Sakai K., Shibata M., Shimokawa T., Shomura A., Song J., Takazaki Y., Terasawa K., Tsuji K., Waki K., Yamagata H., Yamane H., Yoshiki S., Yoshihara R., Yukawa K., Zhong H., Iwama H., Endo T., Ito H., Hahn J.H., Kim H.-I., Eun M.-Y., Yano M., Jiang J., Gojobori T. Nature 420:312-316(2002) [PubMed: 12447438] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[3]	"The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[4]	"Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana." The rice annotation project (RAP) Genome Res. 17:175-183(2007) [PubMed: 17210932] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare.
[5]	"The genomes of Oryza sativa: a history of duplications." Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H. PLoS Biol. 3:266-281(2005) [PubMed: 15685292] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare.
[6]	"Characterization of the genomic structures and selective expression profiles of nine class I small heat shock protein genes clustered on two chromosomes in rice (Oryza sativa L.)." Guan J.-C., Jinn T.-L., Yeh C.-H., Feng S.-P., Chen Y.-M., Lin C.-Y. Plant Mol. Biol. 56:795-809(2004) [PubMed: 15803416] [Abstract] Cited for: INDUCTION.
[7]	"Rice sHsp genes: genomic organization and expression profiling under stress and development." Sarkar N.K., Kim Y.-K., Grover A. BMC Genomics 10:393-393(2009) [PubMed: 19703271] [Abstract] Cited for: GENE FAMILY.

Cross-references

Sequence databases
EMBLGenBankDDBJ	U81385 Genomic DNA. Translation: AAB39856.1. AP003250 Genomic DNA. Translation: BAB64125.1. AP008207 Genomic DNA. Translation: BAF03867.1. CM000138 Genomic DNA. Translation: EAZ10445.1.
PIR	T04171.
RefSeq	NP_001041953.1.
UniGene	Os.80713
3D structure databases
SMR	Q943E7. Positions 2-149.
ModBase	Search...
Genome annotation databases
GeneID	4325696.
KEGG	osa:4325696.
Organism-specific databases
Gramene	Q943E7.
Family and domain databases
InterPro	IPR002068. Hsp20. IPR008978. HSP20-like_chaperone. [Graphical view]
Pfam	PF00011. HSP20. 1 hit. [Graphical view]
PROSITE	PS01031. HSP20. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

HS16C_ORYSJ

Accession

Primary (citable) accession number: Q943E7
Secondary accession number(s): P93437, Q0JQW1

Entry history

Integrated into UniProtKB/Swiss-Prot:	May 2, 2006
Last sequence update:	December 1, 2001
Last modified:	November 24, 2009
This is version 39 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation project

PPAP (Plant Proteome Annotation Project)