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Protein

Sulfate permease family protein 3

Gene

sulp-3

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Possible sulfate transporter.

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

Transport

Enzyme and pathway databases

ReactomeiR-CEL-427601. Multifunctional anion exchangers.

Protein family/group databases

TCDBi2.A.53.2.20. the sulfate permease (sulp) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Sulfate permease family protein 3
Gene namesi
Name:sulp-3
ORF Names:F41D9.5
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome X

Organism-specific databases

WormBaseiF41D9.5; CE38957; WBGene00018283; sulp-3.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei30 – 5223HelicalSequence analysisAdd
BLAST
Transmembranei64 – 8421HelicalSequence analysisAdd
BLAST
Transmembranei86 – 10621HelicalSequence analysisAdd
BLAST
Transmembranei113 – 13321HelicalSequence analysisAdd
BLAST
Transmembranei196 – 21621HelicalSequence analysisAdd
BLAST
Transmembranei232 – 25221HelicalSequence analysisAdd
BLAST
Transmembranei274 – 29421HelicalSequence analysisAdd
BLAST
Transmembranei302 – 32221HelicalSequence analysisAdd
BLAST
Transmembranei359 – 37921HelicalSequence analysisAdd
BLAST
Transmembranei398 – 41821HelicalSequence analysisAdd
BLAST
Transmembranei433 – 45321HelicalSequence analysisAdd
BLAST
Transmembranei497 – 51721HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 782782Sulfate permease family protein 3PRO_0000080193Add
BLAST

Proteomic databases

PaxDbiQ94225.

Interactioni

Protein-protein interaction databases

STRINGi6239.F41D9.5.

Structurei

3D structure databases

ProteinModelPortaliQ94225.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini546 – 700155STASPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 STAS domain.PROSITE-ProRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0236. Eukaryota.
COG0659. LUCA.
GeneTreeiENSGT00760000119026.
HOGENOMiHOG000022364.
InParanoidiQ94225.
KOiK14453.
OMAiWERCKSE.
OrthoDBiEOG76T9QT.
PhylomeDBiQ94225.

Family and domain databases

Gene3Di3.30.750.24. 2 hits.
InterProiIPR018045. S04_transporter_CS.
IPR011547. SLC26A/SulP_dom.
IPR001902. SLC26A/SulP_fam.
IPR002645. STAS_dom.
IPR030328. SULP-3.
[Graphical view]
PANTHERiPTHR11814. PTHR11814. 3 hits.
PTHR11814:SF91. PTHR11814:SF91. 3 hits.
PfamiPF01740. STAS. 1 hit.
PF00916. Sulfate_transp. 1 hit.
[Graphical view]
SUPFAMiSSF52091. SSF52091. 2 hits.
TIGRFAMsiTIGR00815. sulP. 1 hit.
PROSITEiPS01130. SLC26A. 1 hit.
PS50801. STAS. 1 hit.
[Graphical view]

Sequences (2)i

Sequence statusi: Complete.

This entry describes 2 isoformsi produced by alternative splicing. AlignAdd to basket

Isoform a (identifier: Q94225-1) [UniParc]FASTAAdd to basket

This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

« Hide

        10         20         30         40         50
MYKKMSLRQL FSDRPPLNAV LQEKAQKLRY ACSPSKCIHS LLSFLPIITW
60 70 80 90 100
LPKYDWSHSF FGDLSGGLTM AVFSVPQGIA LASITGVPPV YGLYTAIFPS
110 120 130 140 150
FLYIFFGTSK HNALGGFAVL SLMTHGAIEK VMLRTATSYN ATAYVNHTLD
160 170 180 190 200
ELLDKENETA LISNTTLMQI LGNETSFVEE VTMEMWTEGV TPVKQIHVAT
210 220 230 240 250
TIIFLAGVIQ VFMGVFRLQY LTSLFSEQVM SGFVVGGGIH VFFAQIGNML
260 270 280 290 300
GIELPRRSGP GYLYYRIWDL VENLDNVHIP TVCISLSSFL FLVFGKEYLA
310 320 330 340 350
PWLNSAFNYP VPFELVLVVV GITATNYAEL SLRHDVKVVG NIPTEFPPPS
360 370 380 390 400
LPRFDLIRHI GLNAAAIAIT AVAIHITVAK VVEKRYKYKI NHGQELYALG
410 420 430 440 450
FVGVLSSFFP VFPVTSGFAR SVVGAAVGGS TQLTCLFSSL ALLSVILCIG
460 470 480 490 500
PALEYLPQCI LSAMIIFAQK GMLEKFGELK SLWPVFKIDF TIWLMSFFLT
510 520 530 540 550
VCYDMGEGLL MAIGFAVLTT IIRTQRPKWH FLSRDDDTEN YKETKKRDLE
560 570 580 590 600
RIQGNVCIFR MDAPLIFTSS DRFTMSVWQC VKKWERCKSE SFVTIEQMNS
610 620 630 640 650
DRSADIFDSK LKSARRRWKR DQKSENRCKL VIDCDGFPYV DYLGLSTLKS
660 670 680 690 700
VYVDLQAAGI QCFFVVQKSD LKKLFRATDF YEVVDESKVF NKVGDAVKAA
710 720 730 740 750
EQHISSPKTT KEILTALASI ATTDTVLIDE ESSDSNDNDD AEIQERITEE
760 770 780
SENSEEVMSE TSVSIEDATS LTSSRNSINS EE
Length:782
Mass (Da):87,475
Last modified:July 11, 2006 - v3
Checksum:i36F1A26BAFF3DA3C
GO
Isoform b (identifier: Q94225-2) [UniParc]FASTAAdd to basket

The sequence of this isoform differs from the canonical sequence as follows:
     318-345: VVVGITATNYAELSLRHDVKVVGNIPTE → LTHYLINR

Show »
Length:762
Mass (Da):85,509
Checksum:iCA563FE521A66EA4
GO

Alternative sequence

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Alternative sequencei318 – 34528VVVGI…NIPTE → LTHYLINR in isoform b. 1 PublicationVSP_019780Add
BLAST

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY887909 mRNA. Translation: AAX34421.1.
AY954524 mRNA. Translation: AAX34432.2.
FO081091 Genomic DNA. Translation: CCD69047.1.
PIRiT25751.
RefSeqiNP_509424.2. NM_077023.4. [Q94225-1]
UniGeneiCel.22934.

Genome annotation databases

EnsemblMetazoaiF41D9.5; F41D9.5; WBGene00018283. [Q94225-1]
GeneIDi181094.
KEGGicel:CELE_F41D9.5.
UCSCiF41D9.5. c. elegans. [Q94225-1]

Keywords - Coding sequence diversityi

Alternative splicing

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY887909 mRNA. Translation: AAX34421.1.
AY954524 mRNA. Translation: AAX34432.2.
FO081091 Genomic DNA. Translation: CCD69047.1.
PIRiT25751.
RefSeqiNP_509424.2. NM_077023.4. [Q94225-1]
UniGeneiCel.22934.

3D structure databases

ProteinModelPortaliQ94225.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F41D9.5.

Protein family/group databases

TCDBi2.A.53.2.20. the sulfate permease (sulp) family.

Proteomic databases

PaxDbiQ94225.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF41D9.5; F41D9.5; WBGene00018283. [Q94225-1]
GeneIDi181094.
KEGGicel:CELE_F41D9.5.
UCSCiF41D9.5. c. elegans. [Q94225-1]

Organism-specific databases

CTDi181094.
WormBaseiF41D9.5; CE38957; WBGene00018283; sulp-3.

Phylogenomic databases

eggNOGiKOG0236. Eukaryota.
COG0659. LUCA.
GeneTreeiENSGT00760000119026.
HOGENOMiHOG000022364.
InParanoidiQ94225.
KOiK14453.
OMAiWERCKSE.
OrthoDBiEOG76T9QT.
PhylomeDBiQ94225.

Enzyme and pathway databases

ReactomeiR-CEL-427601. Multifunctional anion exchangers.

Miscellaneous databases

NextBioi912382.
PROiQ94225.

Family and domain databases

Gene3Di3.30.750.24. 2 hits.
InterProiIPR018045. S04_transporter_CS.
IPR011547. SLC26A/SulP_dom.
IPR001902. SLC26A/SulP_fam.
IPR002645. STAS_dom.
IPR030328. SULP-3.
[Graphical view]
PANTHERiPTHR11814. PTHR11814. 3 hits.
PTHR11814:SF91. PTHR11814:SF91. 3 hits.
PfamiPF01740. STAS. 1 hit.
PF00916. Sulfate_transp. 1 hit.
[Graphical view]
SUPFAMiSSF52091. SSF52091. 2 hits.
TIGRFAMsiTIGR00815. sulP. 1 hit.
PROSITEiPS01130. SLC26A. 1 hit.
PS50801. STAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The abts and sulp families of anion transporters from Caenorhabditis elegans."
    Sherman T., Chernova M.N., Clark J.S., Jiang L., Alper S.L., Nehrke K.
    Am. J. Physiol. 289:C341-C351(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA] (ISOFORMS A AND B).
  2. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiSULP3_CAEEL
AccessioniPrimary (citable) accession number: Q94225
Secondary accession number(s): Q58G77, Q58QG5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: July 11, 2006
Last modified: May 11, 2016
This is version 108 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.