Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q941B6

- UBC37_ARATH

UniProt

Q941B6 - UBC37_ARATH

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Probable ubiquitin-conjugating enzyme E2 37

Gene

UBC37

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli

Functioni

Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins.By similarity

Catalytic activityi

ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.PROSITE-ProRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei99 – 991Glycyl thioester intermediatePROSITE-ProRule annotation

GO - Molecular functioni

  1. acid-amino acid ligase activity Source: InterPro
  2. ATP binding Source: UniProtKB-KW

GO - Biological processi

  1. protein ubiquitination Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Ligase

Keywords - Biological processi

Ubl conjugation pathway

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciARA:AT3G24515-MONOMER.
UniPathwayiUPA00143.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable ubiquitin-conjugating enzyme E2 37 (EC:6.3.2.19)
Alternative name(s):
Ubiquitin carrier protein 37
Gene namesi
Name:UBC37
Ordered Locus Names:At3g24515
ORF Names:MOB24.7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 3

Organism-specific databases

TAIRiAT3G24515.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 409409Probable ubiquitin-conjugating enzyme E2 37PRO_0000345202Add
BLAST

Proteomic databases

PaxDbiQ941B6.
PRIDEiQ941B6.

Expressioni

Gene expression databases

GenevestigatoriQ941B6.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G24515.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ941B6.
SMRiQ941B6. Positions 10-167.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi385 – 3884Poly-Glu

Sequence similaritiesi

Belongs to the ubiquitin-conjugating enzyme family.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG5078.
HOGENOMiHOG000185102.
InParanoidiQ941B6.
KOiK13960.
OMAiSAACKEN.

Family and domain databases

Gene3Di3.10.110.10. 1 hit.
InterProiIPR000608. UBQ-conjugat_E2.
IPR023313. UBQ-conjugating_AS.
IPR016135. UBQ-conjugating_enzyme/RWD.
[Graphical view]
PfamiPF00179. UQ_con. 1 hit.
[Graphical view]
SUPFAMiSSF54495. SSF54495. 1 hit.
PROSITEiPS00183. UBIQUITIN_CONJUGAT_1. 1 hit.
PS50127. UBIQUITIN_CONJUGAT_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q941B6 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAQAARLSLR MQKELKLLLS DPPHGASFPH LSSAANGSGD FSTFSTIDAQ
60 70 80 90 100
IEGPEDTVYA NGIFNLKIQI PERYPFQPPI VSFATPIYHP NIDNSGRICL
110 120 130 140 150
DILNLPPKGA WQPSLNISTV LTSMRLLLSE PNPDDGLMCE VSREYKYNRQ
160 170 180 190 200
TFDYKAREMT EKYAKVKADG CSTSLQIKNH GDEKSGESGN SVKLKLTVES
210 220 230 240 250
SLSIAHTVKR ETAGRDEQED GNGKRKAVVG FGEGNSFGND GIKRSRKKLS
260 270 280 290 300
LALPSQSQKK DLCGEEELTR GVSAACKENK KPNLNGKKLS LGLKQPCNDT
310 320 330 340 350
LASFRTSAAK SDNNRLSRKL SLRSPLGELN EVSKPEVLAQ TDMKLEMNQN
360 370 380 390 400
EDARSLRGEF ENSVLEETSM AESIVVLDSD DSGQEEEERV SSSRSRLSLA

KRRVLKCRP
Length:409
Mass (Da):45,083
Last modified:May 3, 2011 - v2
Checksum:iD8E0591E25489ACE
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti398 – 3981S → L in AAY44876. (PubMed:16339806)Curated
Sequence conflicti398 – 3981S → L in AAK96485. (PubMed:14593172)Curated
Sequence conflicti398 – 3981S → L in AAL31249. (PubMed:14593172)Curated

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DQ027050 mRNA. Translation: AAY44876.1.
AB020746 Genomic DNA. Translation: BAB02001.1.
CP002686 Genomic DNA. Translation: AEE76912.1.
AY052292 mRNA. Translation: AAK96485.1.
AY061922 mRNA. Translation: AAL31249.1.
RefSeqiNP_566751.1. NM_113362.1.
UniGeneiAt.26504.

Genome annotation databases

EnsemblPlantsiAT3G24515.1; AT3G24515.1; AT3G24515.
GeneIDi822045.
KEGGiath:AT3G24515.

Cross-referencesi

Web resourcesi

PlantsUBQ

A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
DQ027050 mRNA. Translation: AAY44876.1 .
AB020746 Genomic DNA. Translation: BAB02001.1 .
CP002686 Genomic DNA. Translation: AEE76912.1 .
AY052292 mRNA. Translation: AAK96485.1 .
AY061922 mRNA. Translation: AAL31249.1 .
RefSeqi NP_566751.1. NM_113362.1.
UniGenei At.26504.

3D structure databases

ProteinModelPortali Q941B6.
SMRi Q941B6. Positions 10-167.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 3702.AT3G24515.1-P.

Proteomic databases

PaxDbi Q941B6.
PRIDEi Q941B6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT3G24515.1 ; AT3G24515.1 ; AT3G24515 .
GeneIDi 822045.
KEGGi ath:AT3G24515.

Organism-specific databases

TAIRi AT3G24515.

Phylogenomic databases

eggNOGi COG5078.
HOGENOMi HOG000185102.
InParanoidi Q941B6.
KOi K13960.
OMAi SAACKEN.

Enzyme and pathway databases

UniPathwayi UPA00143 .
BioCyci ARA:AT3G24515-MONOMER.

Miscellaneous databases

PROi Q941B6.

Gene expression databases

Genevestigatori Q941B6.

Family and domain databases

Gene3Di 3.10.110.10. 1 hit.
InterProi IPR000608. UBQ-conjugat_E2.
IPR023313. UBQ-conjugating_AS.
IPR016135. UBQ-conjugating_enzyme/RWD.
[Graphical view ]
Pfami PF00179. UQ_con. 1 hit.
[Graphical view ]
SUPFAMi SSF54495. SSF54495. 1 hit.
PROSITEi PS00183. UBIQUITIN_CONJUGAT_1. 1 hit.
PS50127. UBIQUITIN_CONJUGAT_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis."
    Kraft E., Stone S.L., Ma L., Su N., Gao Y., Lau O.-S., Deng X.-W., Callis J.
    Plant Physiol. 139:1597-1611(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [MRNA], FUNCTION, GENE FAMILY, NOMENCLATURE.
  2. "Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones."
    Kaneko T., Katoh T., Sato S., Nakamura Y., Asamizu E., Tabata S.
    DNA Res. 7:217-221(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  3. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  4. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.

Entry informationi

Entry nameiUBC37_ARATH
AccessioniPrimary (citable) accession number: Q941B6
Secondary accession number(s): Q9LV54
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 22, 2008
Last sequence update: May 3, 2011
Last modified: October 29, 2014
This is version 85 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3