Q940J8 (Q940J8_ARATH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pectinacetylesterase family protein EMBL AEE84177.1

Submitted name:
Putative pectinacetylesterase protein EMBL AAK96722.1

Gene names

Name:	T5K18.190 EMBL AAK96722.1
Ordered Locus Names:	At4g19410 TAIR At4g19410
ORF Names:	AT4G19410 EMBL AEE84177.1

Organism

Arabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL AAK96722.1

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	391 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	membrane Inferred from direct assay PubMed 17432890. Source: TAIR plant-type cell wall Inferred from direct assay PubMed 16287169. Source: TAIR plasmodesma Inferred from direct assay PubMed 21533090. Source: TAIR
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q940J8 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 41E52AD064844FF4	FASTA	391	42,125
	10 20 30 40 50 60 MGRLKQCWSS LLVLAVLVIG TGAVPITYLQ SAVAKGAVCL DGSAPAYHFD KGFGSGVNNW 70 80 90 100 110 120 IVHMEGGGWC TDVASCNERK GTMKGSSKFM NKDFGFSGIL GGKQSTNPDF YNWNRIKVRY 130 140 150 160 170 180 CDGSSFTGNV EAVNPANKLF FRGARVWRAV VDDLMAKGMK NAQNAILSGC SAGALAAILH 190 200 210 220 230 240 CDTFRAILPR TASVKCVSDA GYFIHGKDIT GGSYIQSYYS KVVALHGSAK SLPVSCTSKM 250 260 270 280 290 300 KPELCFFPQY VVPSMRTPLF VINAAFDSWQ IKNVLAPTAV DKGKEWKNCK LDLKKCSAAQ 310 320 330 340 350 360 LKTVQGFRDQ MMRALSPVHS TPSRGLFLDS CHAHCQGGSA ASWSGDKGPQ VANTRIAKAV 370 380 390 GNWFYGRSAF QKIDCPSPTC NPTCPAISTE D

References

[1]	Southwick A., Karlin-Neumann G., Nguyen M., Lam B., Miranda M., Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C. , Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W. Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[2]	Lam B., Southwick A., Karlin-Neumann G., Nguyen M., Miranda M., Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C. , Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W. Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[3]	"Full-length messenger RNA sequences greatly improve genome annotation." Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L. Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[4]	Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[5]	"Features of Arabidopsis genes and genome discovered using full-length cDNAs." Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A. Plant Mol. Biol. 60:71-87(2006) Cited for: NUCLEOTIDE SEQUENCE.
[6]	"Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs." Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Morosawa T., Kamiya A., Narusaka M., Shin-i T., Nakagawa M., Sakamoto N., Oishi K., Kohara Y., Kobayashi M., Toyoda A., Sakaki Y., Sakurai T., Iida K. , Akiyama K., Satou M., Toyoda T., Konagaya A., Carninci P., Kawai J., Hayashizaki Y., Shinozaki K. Submitted (JUL-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE.
[7]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY054531 mRNA. Translation: AAK96722.1. AY064626 mRNA. Translation: AAL47339.1. AY087371 mRNA. Translation: AAM64921.1. CP002687 Genomic DNA. Translation: AEE84177.1. AK228936 mRNA. Translation: BAF00825.1.
IPI	IPI00521088.
RefSeq	NP_567585.1. NM_118061.3.
UniGene	At.22429.
3D structure databases
SMR	Q940J8. Positions 144-185.
ModBase	Search...
Protein-protein interaction databases
IntAct	Q940J8. 1 interaction.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT4G19410.1; AT4G19410.1; AT4G19410.
GeneID	827682.
KEGG	ath:AT4G19410.
Organism-specific databases
TAIR	At4g19410.
Phylogenomic databases
HOGENOM	HOG000238558.
InParanoid	Q940J8.
ProtClustDB	CLSN2687480.
Gene expression databases
Genevestigator	Q940J8.
Family and domain databases
InterPro	IPR004963. Pec_acetylest. [Graphical view]
PANTHER	PTHR21562. PTHR21562. 1 hit.
Pfam	PF03283. PAE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q940J8_ARATH

Accession

Primary (citable) accession number: Q940J8

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	May 1, 2013
This is version 65 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)