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Protein

Gibberellin receptor GID1C

Gene

GID1C

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Functions as soluble gibberellin (GA) receptor. GA is an essential hormone that regulates growth and development in plants. Binds with high affinity the biologically active gibberellin GA4, but has no affinity for the biologically inactive GAs. In response to GA, interacts with specific DELLA proteins, known as repressors of GA-induced growth, and targets them for degradation via proteasome. Seems to be required for GA signaling that controls root growth, seed germination and stem elongation. Partially redundant with GID1A and GID1B.3 Publications

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei125GibberellinBy similarity1
Active sitei189PROSITE-ProRule annotationBy similarity1
Binding sitei189GibberellinBy similarity1
Active sitei287PROSITE-ProRule annotationBy similarity1
Binding sitei318Gibberellin; via amide nitrogenBy similarity1

GO - Molecular functioni

GO - Biological processi

  • catabolic process Source: GO_Central
  • floral organ morphogenesis Source: TAIR
  • fruit morphogenesis Source: CAFA
  • gibberellin mediated signaling pathway Source: TAIR
  • negative regulation of gene expression Source: CAFA
  • positive regulation of gibberellic acid mediated signaling pathway Source: TAIR
  • response to gibberellin Source: CAFA

Keywordsi

Molecular functionHydrolase, Receptor
Biological processGibberellin signaling pathway

Enzyme and pathway databases

BioCyciARA:AT5G27320-MONOMER

Protein family/group databases

ESTHERiarath-AT5G27320 Plant_carboxylesterase
MEROPSiS09.A10

Names & Taxonomyi

Protein namesi
Recommended name:
Gibberellin receptor GID1C (EC:3.-.-.-)
Alternative name(s):
AtCXE19
Carboxylesterase 19
GID1-like protein 3
Protein GA INSENSITIVE DWARF 1C
Short name:
AtGID1C
Gene namesi
Name:GID1C
Synonyms:CXE19, GID1L3
Ordered Locus Names:At5g27320
ORF Names:F21A20.30
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G27320
TAIRilocus:2146425 AT5G27320

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

Pathology & Biotechi

Disruption phenotypei

No visible phenotype under normal growth condition.2 Publications

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemovedBy similarity
ChainiPRO_00000715602 – 344Gibberellin receptor GID1CAdd BLAST343

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei2N-acetylalanineBy similarity1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ940G6
PRIDEiQ940G6

Expressioni

Tissue specificityi

Widely expressed.1 Publication

Gene expression databases

ExpressionAtlasiQ940G6 baseline and differential
GenevisibleiQ940G6 AT

Interactioni

Subunit structurei

Interacts with the DELLA proteins GAI, RGA, RGL1, RGL2 and RGL3 in a GA-dependent manner.3 Publications

Binary interactionsi

Show more details

Protein-protein interaction databases

BioGridi18064, 3 interactors
DIPiDIP-37663N
IntActiQ940G6, 6 interactors
STRINGi3702.AT5G27320.1

Structurei

3D structure databases

ProteinModelPortaliQ940G6
SMRiQ940G6
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni113 – 114Gibberellin bindingBy similarity2

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi111 – 113Involved in the stabilization of the negatively charged intermediate by the formation of the oxyanion holeBy similarity3

Sequence similaritiesi

Belongs to the 'GDXG' lipolytic enzyme family.Curated

Phylogenomic databases

eggNOGiKOG1515 Eukaryota
COG0657 LUCA
HOGENOMiHOG000152323
InParanoidiQ940G6
KOiK14493
OMAiKQLLFYP
OrthoDBiEOG09360EOQ
PhylomeDBiQ940G6

Family and domain databases

Gene3Di3.40.50.1820, 1 hit
InterProiView protein in InterPro
IPR029058 AB_hydrolase
IPR013094 AB_hydrolase_3
IPR002168 Lipase_GDXG_HIS_AS
IPR033140 Lipase_GDXG_put_SER_AS
PfamiView protein in Pfam
PF07859 Abhydrolase_3, 1 hit
SUPFAMiSSF53474 SSF53474, 1 hit
PROSITEiView protein in PROSITE
PS01173 LIPASE_GDXG_HIS, 1 hit
PS01174 LIPASE_GDXG_SER, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q940G6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD
60 70 80 90 100
RKVPANANPV NGVFSFDVII DRQTNLLSRV YRPADAGTSP SITDLQNPVD
110 120 130 140 150
GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE
160 170 180 190 200
NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV
210 220 230 240 250
RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL
260 270 280 290 300
PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL
310 320 330 340
KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ
Length:344
Mass (Da):38,426
Last modified:December 1, 2001 - v1
Checksum:i40B4C048B1FB6C15
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007123 Genomic DNA No translation available.
CP002688 Genomic DNA Translation: AED93672.1
AY054653 mRNA Translation: AAK96844.1
AY128729 mRNA Translation: AAM91129.1
RefSeqiNP_198084.1, NM_122614.4
UniGeneiAt.22176

Genome annotation databases

EnsemblPlantsiAT5G27320.1; AT5G27320.1; AT5G27320
GeneIDi832790
GrameneiAT5G27320.1; AT5G27320.1; AT5G27320
KEGGiath:AT5G27320

Similar proteinsi

Entry informationi

Entry nameiGID1C_ARATH
AccessioniPrimary (citable) accession number: Q940G6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 22, 2005
Last sequence update: December 1, 2001
Last modified: May 23, 2018
This is version 107 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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