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Protein

Tryptophan aminotransferase-related protein 4

Gene

TAR4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Probable aminotransferase.By similarity

Cofactori

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Binding sitei124Pyridoxal phosphateBy similarity1
Binding sitei239Pyridoxal phosphateBy similarity1
Binding sitei259Pyridoxal phosphateBy similarity1
Binding sitei293Pyridoxal phosphateBy similarity1

GO - Molecular functioni

Keywordsi

Molecular functionAminotransferase, Transferase
LigandPyridoxal phosphate

Names & Taxonomyi

Protein namesi
Recommended name:
Tryptophan aminotransferase-related protein 4 (EC:2.6.1.-)
Gene namesi
Name:TAR4
Ordered Locus Names:At1g34060
ORF Names:F12G12.12, F12G12.150
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

AraportiAT1G34060
TAIRilocus:2009031 AT1G34060

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 26HelicalSequence analysisAdd BLAST21

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004116771 – 463Tryptophan aminotransferase-related protein 4Add BLAST463

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei285N6-(pyridoxal phosphate)lysineSequence analysis1

Proteomic databases

PaxDbiQ93Z38

Expressioni

Gene expression databases

ExpressionAtlasiQ93Z38 baseline and differential
GenevisibleiQ93Z38 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G34060.1

Structurei

3D structure databases

ProteinModelPortaliQ93Z38
SMRiQ93Z38
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni163 – 164Pyridoxal phosphate bindingBy similarity2
Regioni259 – 262Pyridoxal phosphate bindingBy similarity4
Regioni282 – 285Pyridoxal phosphate bindingBy similarity4

Sequence similaritiesi

Belongs to the alliinase family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG410IIDZ Eukaryota
ENOG410XS9Z LUCA
HOGENOMiHOG000237549
InParanoidiQ93Z38
OMAiGRNDNIT
OrthoDBiEOG093607DE
PhylomeDBiQ93Z38

Family and domain databases

Gene3Di2.10.25.30, 1 hit
3.40.640.10, 1 hit
3.90.1150.10, 1 hit
InterProiView protein in InterPro
IPR006948 Alliinase_C
IPR037029 Alliinase_N_sf
IPR006947 EGF_alliinase
IPR015424 PyrdxlP-dep_Trfase
IPR015422 PyrdxlP-dep_Trfase_dom1
IPR015421 PyrdxlP-dep_Trfase_major
PfamiView protein in Pfam
PF04864 Alliinase_C, 1 hit
PF04863 EGF_alliinase, 1 hit
SUPFAMiSSF53383 SSF53383, 1 hit

Sequencei

Sequence statusi: Complete.

Q93Z38-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMQKKLLLIV SIILNLVFTI HILYYSSTTW NPTWTNRAAA EAETVASFSC
60 70 80 90 100
SGHGRAFVDG LGVLDGQKPP CECNNCYIGK DCSVLLKDCP VDANSGDPLF
110 120 130 140 150
LEPFWMRQAE RSAILVSGWH RMSYIYEDGT YVSRELEKVI RKLHSVVGNA
160 170 180 190 200
VTDNRFVIFG SGTTQLLAAA VHALSLTNSS VSSPARLLTS IPYYAMYKDQ
210 220 230 240 250
AEFFDSAHLK FEGNASAWKQ SGRNDNITQV IEVVTSPNNP DGKLKRAVLD
260 270 280 290 300
GPNVKTLHDY AYYWPHFSPI THPVDEDLSL FSLSKTTGHA GSRFGWGLVK
310 320 330 340 350
DKAIYEKMDR FIRLTSMGVS KETQLHVLQL LKVVVGDGGN EIFSFGYGTV
360 370 380 390 400
KKRWETLNKI FSMSTRFSLQ TIKPEYCNYF KKVREFTPSY AWVKCERPED
410 420 430 440 450
TNCYEIFRAA KITGRNGNVF GSEERFVRLS LIRSQDDFDQ LIAMLKKLVY
460
HEEDVPSENF MYI
Length:463
Mass (Da):52,430
Last modified:July 27, 2011 - v2
Checksum:iAB0FD34E580AD0BA
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti100F → S in AAL25576 (PubMed:14593172).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC015446 Genomic DNA Translation: AAG12531.1
CP002684 Genomic DNA Translation: AEE31667.1
AY058162 mRNA Translation: AAL25576.1
PIRiE86464
RefSeqiNP_564435.1, NM_103128.4
UniGeneiAt.26614

Genome annotation databases

EnsemblPlantsiAT1G34060.1; AT1G34060.1; AT1G34060
GeneIDi840303
GrameneiAT1G34060.1; AT1G34060.1; AT1G34060
KEGGiath:AT1G34060

Similar proteinsi

Entry informationi

Entry nameiTAR4_ARATH
AccessioniPrimary (citable) accession number: Q93Z38
Secondary accession number(s): Q9FX14
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 27, 2011
Last sequence update: July 27, 2011
Last modified: April 25, 2018
This is version 81 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health