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Unreviewed, UniProtKB/TrEMBL Q93Z30 (Q93Z30_ARATH)

Last modified May 5, 2009. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    AT4g18950/F13C5_120 EMBL AAL25602.1
Submitted name:
    At4g18950/F13C5_120 EMBL AAM98278.1
    Protein kinase-like protein EMBL AAM65379.1
Gene names
Ordered Locus Names: At4g18950 TAIR At4g18950
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length459 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Sequences

Sequence LengthMass (Da)Tools
Q93Z30-1 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 837CA5E952252E02

FASTA45952,618
        10         20         30         40         50         60 
MEEDYQQPRF TIGRQSSMAP EKIPEPSVHS EEEVFEDGEE IDGGVRLMYL ANEGDIEGIK 

        70         80         90        100        110        120 
ELIDSGIDAN YRDIDDRTAL HVAACQGLKD VVELLLDRKA EVDPKDRWGS TPFADAIFYK 

       130        140        150        160        170        180 
NIDVIKILEI HGAKHPMAPM HVKTAREVPE YEINPSELDF TQSKEITKGT YCMAMWRGIQ 

       190        200        210        220        230        240 
VAVKKLDDEV LSDDDQVRKF HDELALLQRL RHPNIVQFLG AVTQSNPMMI VTEYLPRGDL 

       250        260        270        280        290        300 
RELLKRKGQL KPATAVRYAL DIARGMSYLH EIKGDPIIHR DLEPSNILRD DSGHLKVADF 

       310        320        330        340        350        360 
GVSKLVTVKE DKPFTCQDIS CRYIAPEVFT SEEYDTKADV FSFALIVQEM IEGRMPFAEK 

       370        380        390        400        410        420 
EDSEASEAYA GKHRPLFKAP SKNYPHGLKT LIEECWHEKP AKRPTFREII KRLESILHHM 

       430        440        450 
GHKRQWRMRP LTCFQNFEHK KKHNWDLSSH DGSSSGSHL 

« Hide

References

[1]"Arabidopsis cDNA clones."
Cheuk R., Chen H., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B. expand/collapse author list , Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Arabidopsis ORF clones."
Kim C.J., Chen H., Cheuk R., Shinn P., Bowser L., Carninci P., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B. expand/collapse author list , Lee J.M., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wallender E.K., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Davis R.W., Theologis A., Ecker J.R.
Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Full-length messenger RNA sequences greatly improve genome annotation."
Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed: 12093376] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Features of Arabidopsis genes and genome discovered using full-length cDNAs."
Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
Plant Mol. Biol. 60:71-87(2006)
Cited for: NUCLEOTIDE SEQUENCE.
[5]Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AY058189 mRNA. Translation: AAL25602.1.
AY087826 mRNA. Translation: AAM65379.1.
AY142014 mRNA. Translation: AAM98278.1.
IPIIPI00533887.
RefSeqNP_567568.1.
UniGeneAt.1956

3D structure databases

HSSPHSSP built from PDB template 2PTK based on UniProtKB P00523.
ModBaseSearch...

Protein-protein interaction databases

IntActQ93Z30. 8 interactions.

Proteomic databases

PRIDEQ93Z30.

Genome annotation databases

GeneID827630.
KEGGath:AT4G18950.
NMPDRfig|3702.1.peg.19703.

Organism-specific databases

TAIRAt4g18950.

Phylogenomic databases

OMAQ93Z30. AREVPEY.

Family and domain databases

InterProIPR002110. ANK.
IPR016253. Integrin-linked_kinase.
IPR000719. Prot_kinase_core.
IPR017442. Se/Thr_pkinase-rel.
IPR001245. Tyr_pkinase.
[Graphical view]
Gene3DG3DSA:1.25.40.20. ANK. 1 hit.
PfamPF00023. Ank. 3 hits.
PF00069. Pkinase. 1 hit.
[Graphical view]
PIRSFPIRSF000654. Integrin-linked_kinase. 1 hit.
PRINTSPR00109. TYRKINASE.
ProDomPD000001. Prot_kinase. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SMARTSM00248. ANK. 3 hits.
[Graphical view]
PROSITEPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 2 hits.
PS50011. PROTEIN_KINASE_DOM. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ93Z30_ARATH
AccessionPrimary (citable) accession number: Q93Z30
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: May 5, 2009
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information