Unreviewed,
UniProtKB/TrEMBL Q93Z30 (Q93Z30_ARATH)
Last modified
May 5, 2009.
Version 61.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: AT4g18950/F13C5_120 EMBL AAL25602.1 Submitted name: At4g18950/F13C5_120 EMBL AAM98278.1 Protein kinase-like protein EMBL AAM65379.1 | ||
| Gene names |
| ||
| Organism | Arabidopsis thaliana (Mouse-ear cress) [Complete proteome] | ||
| Taxonomic identifier | 3702 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis |
Protein attributes
| Sequence length | 459 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
Ontologies
| Keywords | |
|---|---|
| Domain | ANK repeat RuleBase RU003321V2 Repeat RuleBase RU003536V1 |
| Molecular function | Kinase Transferase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | protein amino acid phosphorylation Inferred from electronic annotation. Source: InterPro regulation of signal transductionInferred from electronic annotation. Source: InterPro |
| Cellular component | cytoplasm Inferred from direct assay. Source: TAIR nucleusInferred from direct assay. Source: TAIR |
| Molecular function | ATP binding Inferred from electronic annotation. Source: InterPro protein bindingInferred from physical interaction. Source: IntAct protein serine/threonine kinase activityInferred from electronic annotation. Source: InterPro protein tyrosine kinase activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Arabidopsis cDNA clones." Cheuk R., Chen H., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B. Ecker J.R.Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | "Arabidopsis ORF clones." Kim C.J., Chen H., Cheuk R., Shinn P., Bowser L., Carninci P., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hayashizaki Y., Hsuan V.W., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B. Ecker J.R.Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [3] | "Full-length messenger RNA sequences greatly improve genome annotation." Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L. Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed: 12093376] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [4] | "Features of Arabidopsis genes and genome discovered using full-length cDNAs." Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A. Plant Mol. Biol. 60:71-87(2006) Cited for: NUCLEOTIDE SEQUENCE. |
| [5] | Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K. Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| AY058189 mRNA. Translation: AAL25602.1. AY087826 mRNA. Translation: AAM65379.1. AY142014 mRNA. Translation: AAM98278.1. | |
| IPI | IPI00533887. |
| RefSeq | NP_567568.1. |
| UniGene | At.1956 |
3D structure databases | |
| HSSP | HSSP built from PDB template 2PTK based on UniProtKB P00523. |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q93Z30. 8 interactions. |
Proteomic databases | |
| PRIDE | Q93Z30. |
Genome annotation databases | |
| GeneID | 827630. |
| KEGG | ath:AT4G18950. |
| NMPDR | fig|3702.1.peg.19703. |
Organism-specific databases | |
| TAIR | At4g18950. |
Phylogenomic databases | |
| OMA | Q93Z30. AREVPEY. |
Family and domain databases | |
| InterPro | IPR002110. ANK. IPR016253. Integrin-linked_kinase. IPR000719. Prot_kinase_core. IPR017442. Se/Thr_pkinase-rel. IPR001245. Tyr_pkinase. [Graphical view] |
| Gene3D | G3DSA:1.25.40.20. ANK. 1 hit. |
| Pfam | PF00023. Ank. 3 hits. PF00069. Pkinase. 1 hit. [Graphical view] |
| PIRSF | PIRSF000654. Integrin-linked_kinase. 1 hit. |
| PRINTS | PR00109. TYRKINASE. |
| ProDom | PD000001. Prot_kinase. 1 hit. [Graphical view] [Entries sharing at least one domain] |
| SMART | SM00248. ANK. 3 hits. [Graphical view] |
| PROSITE | PS50297. ANK_REP_REGION. 1 hit. PS50088. ANK_REPEAT. 2 hits. PS50011. PROTEIN_KINASE_DOM. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q93Z30_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q93Z30 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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