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Protein

Glucan endo-1,3-beta-glucosidase 6

Gene

At5g58090

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Catalytic activityi

Hydrolysis of (1->3)-beta-D-glucosidic linkages in (1->3)-beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei262NucleophileBy similarity1
Active sitei323Proton donorBy similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processPlant defense

Enzyme and pathway databases

BioCyciARA:AT5G58090-MONOMER

Protein family/group databases

CAZyiCBM43 Carbohydrate-Binding Module Family 43
GH17 Glycoside Hydrolase Family 17

Names & Taxonomyi

Protein namesi
Recommended name:
Glucan endo-1,3-beta-glucosidase 6 (EC:3.2.1.39)
Alternative name(s):
(1->3)-beta-glucan endohydrolase 6
Short name:
(1->3)-beta-glucanase 6
Beta-1,3-endoglucanase 6
Short name:
Beta-1,3-glucanase 6
Gene namesi
Ordered Locus Names:At5g58090
ORF Names:K21L19.12, K21L19_70
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G58090
TAIRilocus:2155841 AT5G58090

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21Sequence analysisAdd BLAST21
ChainiPRO_000001189222 – 455Glucan endo-1,3-beta-glucosidase 6Add BLAST434
PropeptideiPRO_0000011893456 – 477Removed in mature formSequence analysisAdd BLAST22

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi97N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi124N-linked (GlcNAc...) asparagineSequence analysis1
Disulfide bondi363 ↔ 425By similarity
Glycosylationi406N-linked (GlcNAc...) asparagineSequence analysis1
Glycosylationi429N-linked (GlcNAc...) asparagineSequence analysis1
Lipidationi455GPI-anchor amidated glycine1 Publication1

Post-translational modificationi

Contains two additional disulfide bonds.By similarity

Keywords - PTMi

Disulfide bond, Glycoprotein, GPI-anchor, Lipoprotein

Proteomic databases

PaxDbiQ93Z08
PRIDEiQ93Z08

Expressioni

Gene expression databases

ExpressionAtlasiQ93Z08 baseline and differential
GenevisibleiQ93Z08 AT

Interactioni

Protein-protein interaction databases

BioGridi211651 interactor.
IntActiQ93Z08 1 interactor.
STRINGi3702.AT5G58090.1

Structurei

3D structure databases

ProteinModelPortaliQ93Z08
SMRiQ93Z08
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 17 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IEQN Eukaryota
ENOG410YE7X LUCA
HOGENOMiHOG000238221
InParanoidiQ93Z08
KOiK19893
OMAiVACKFPN
OrthoDBiEOG09360BL5
PhylomeDBiQ93Z08

Family and domain databases

InterProiView protein in InterPro
IPR000490 Glyco_hydro_17
IPR017853 Glycoside_hydrolase_SF
IPR012946 X8
PfamiView protein in Pfam
PF00332 Glyco_hydro_17, 1 hit
PF07983 X8, 1 hit
SMARTiView protein in SMART
SM00768 X8, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit
PROSITEiView protein in PROSITE
PS00587 GLYCOSYL_HYDROL_F17, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q93Z08-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGWGSVLLLL AVALLCQRAS SIGANWGTQA SHPLPPDIVV RMLRENGIQK
60 70 80 90 100
VKLFDAEYDT LRALGKSGIE VMVGIPNEML ATLASSLKAA EKWVAKNVST
110 120 130 140 150
HISTDNVNIR YVAVGNEPFL STYNGSYLST TFPALRNIQI AIIKAGLQNQ
160 170 180 190 200
VKVTCPLNAD VYDSSTTFPS GGDFRANIRD LMITIVKFLS ENGGPFTVNI
210 220 230 240 250
YPYISLYTNP DFPVDYAFFD GNAQPLNDGG TFYYNMFDAN YDTLVHALEK
260 270 280 290 300
NGFGNMPIII GEIGWPTDGD SNANLDYAKK FNQGFMAHIS GGKGTPRRPG
310 320 330 340 350
PIDAYLFSLI DEDAKSVQPG YFERHWGIFT FDGLPKYALN LGTTNTGALI
360 370 380 390 400
QAKGVRYLER KWCVMKPNVR LDDPQVAPAV SYACSLGDCT SLGVGTSCAN
410 420 430 440 450
LDGKQNISYA FNSYYQIQDQ LDTACKFPNI SEVTKTDPST GTCRFPIMIE
460 470
PYYGGAAREH GFFFPLLMVA AIAVSIF
Length:477
Mass (Da):52,211
Last modified:October 31, 2003 - v2
Checksum:iB8FE6F29218DF57C
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti219F → L in AAL24251 (PubMed:14593172).Curated1
Sequence conflicti219F → L in AAN18179 (PubMed:14593172).Curated1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB024029 Genomic DNA Translation: BAB11001.1
CP002688 Genomic DNA Translation: AED96996.1
AY058864 mRNA Translation: AAL24251.1
BT000612 mRNA Translation: AAN18179.1
RefSeqiNP_200617.2, NM_125194.4
UniGeneiAt.9709

Genome annotation databases

EnsemblPlantsiAT5G58090.1; AT5G58090.1; AT5G58090
GeneIDi835921
GrameneiAT5G58090.1; AT5G58090.1; AT5G58090
KEGGiath:AT5G58090

Similar proteinsi

Entry informationi

Entry nameiE136_ARATH
AccessioniPrimary (citable) accession number: Q93Z08
Secondary accession number(s): Q9FGT5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 31, 2003
Last sequence update: October 31, 2003
Last modified: April 25, 2018
This is version 120 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome