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Q93Z00

- TCP14_ARATH

UniProt

Q93Z00 - TCP14_ARATH

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Protein
Transcription factor TCP14
Gene
TCP14, At3g47620, F1P2.170
Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. protein binding Source: IntAct
  3. sequence-specific DNA binding transcription factor activity Source: TAIR

GO - Biological processi

  1. cell proliferation Source: TAIR
  2. inflorescence development Source: TAIR
  3. regulation of defense response Source: TAIR
  4. regulation of seed germination Source: TAIR
  5. regulation of transcription, DNA-templated Source: TAIR
  6. response to abscisic acid Source: TAIR
  7. response to cytokinin Source: TAIR
  8. response to gibberellin Source: TAIR
  9. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulation

Keywords - Ligandi

DNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Transcription factor TCP14
Gene namesi
Name:TCP14
Ordered Locus Names:At3g47620
ORF Names:F1P2.170
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548: Chromosome 3

Organism-specific databases

TAIRiAT3G47620.

Subcellular locationi

Nucleus Inferred

GO - Cellular componenti

  1. nucleus Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 489489Transcription factor TCP14
PRO_0000330788Add
BLAST

Proteomic databases

PaxDbiQ93Z00.
PRIDEiQ93Z00.

Expressioni

Gene expression databases

GenevestigatoriQ93Z00.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
ALIS3Q9SLK22EBI-4424563,EBI-4463103
At5g18260Q9FK452EBI-4424563,EBI-4470510
TCP13Q9S7W53EBI-4424563,EBI-4424877

Protein-protein interaction databases

BioGridi9236. 117 interactions.
IntActiQ93Z00. 147 interactions.
STRINGi3702.AT3G47620.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ93Z00.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini117 – 17155TCP
Add
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi54 – 9946Gln-rich
Add
BLAST
Compositional biasi318 – 33922Ala-rich
Add
BLAST
Compositional biasi340 – 36425Gly-rich
Add
BLAST
Compositional biasi441 – 45616His-rich
Add
BLAST

Sequence similaritiesi

Contains 1 TCP domain.

Phylogenomic databases

eggNOGiNOG311108.
HOGENOMiHOG000241759.
InParanoidiQ93Z00.
OMAiTFPSINT.
PhylomeDBiQ93Z00.

Family and domain databases

InterProiIPR017887. TF_TCP_subgr.
IPR005333. Transcription_factor_TCP.
[Graphical view]
PfamiPF03634. TCP. 1 hit.
[Graphical view]
PROSITEiPS51369. TCP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q93Z00-1 [UniParc]FASTAAdd to Basket

« Hide

MQKPTSSILN VIMDGGDSVG GGGGDDHHRH LHHHHRPTFP FQLLGKHDPD    50
DNHQQQPSPS SSSSLFSLHQ HQQLSQSQPQ SQSQKSQPQT TQKELLQTQE 100
ESAVVAAKKP PLKRASTKDR HTKVDGRGRR IRMPALCAAR VFQLTRELGH 150
KSDGETIEWL LQQAEPSVIA ATGTGTIPAN FTSLNISLRS SGSSMSLPSH 200
FRSAASTFSP NNIFSPAMLQ QQQQQQRGGG VGFHHPHLQG RAPTSSLFPG 250
IDNFTPTTSF LNFHNPTKQE GDQDSEELNS EKKRRIQTTS DLHQQQQQHQ 300
HDQIGGYTLQ SSNSGSTATA AAAQQIPGNF WMVAAAAAAG GGGGNNNQTG 350
GLMTASIGTG GGGGEPVWTF PSINTAAAAL YRSGVSGVPS GAVSSGLHFM 400
NFAAPMAFLT GQQQLATTSN HEINEDSNNN EGGRSDGGGD HHNTQRHHHH 450
QQQHHHNILS GLNQYGRQVS GDSQASGSLG GGDEEDQQD 489
Length:489
Mass (Da):52,300
Last modified:December 1, 2001 - v1
Checksum:iAC777E2D96FC7586
GO

Sequence cautioni

The sequence CAB61988.1 differs from that shown. Reason: Erroneous initiation.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL132955 Genomic DNA. Translation: CAB61988.1. Different initiation.
CP002686 Genomic DNA. Translation: AEE78308.1.
AY058874 mRNA. Translation: AAL24261.1.
AY103304 mRNA. Translation: AAM65356.1.
PIRiT45722.
RefSeqiNP_190346.2. NM_114630.3.
UniGeneiAt.21251.

Genome annotation databases

EnsemblPlantsiAT3G47620.1; AT3G47620.1; AT3G47620.
GeneIDi823916.
KEGGiath:AT3G47620.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL132955 Genomic DNA. Translation: CAB61988.1 . Different initiation.
CP002686 Genomic DNA. Translation: AEE78308.1 .
AY058874 mRNA. Translation: AAL24261.1 .
AY103304 mRNA. Translation: AAM65356.1 .
PIRi T45722.
RefSeqi NP_190346.2. NM_114630.3.
UniGenei At.21251.

3D structure databases

ProteinModelPortali Q93Z00.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

BioGridi 9236. 117 interactions.
IntActi Q93Z00. 147 interactions.
STRINGi 3702.AT3G47620.1-P.

Proteomic databases

PaxDbi Q93Z00.
PRIDEi Q93Z00.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblPlantsi AT3G47620.1 ; AT3G47620.1 ; AT3G47620 .
GeneIDi 823916.
KEGGi ath:AT3G47620.

Organism-specific databases

TAIRi AT3G47620.

Phylogenomic databases

eggNOGi NOG311108.
HOGENOMi HOG000241759.
InParanoidi Q93Z00.
OMAi TFPSINT.
PhylomeDBi Q93Z00.

Gene expression databases

Genevestigatori Q93Z00.

Family and domain databases

InterProi IPR017887. TF_TCP_subgr.
IPR005333. Transcription_factor_TCP.
[Graphical view ]
Pfami PF03634. TCP. 1 hit.
[Graphical view ]
PROSITEi PS51369. TCP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
    Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
    , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "Arabidopsis BRANCHED1 acts as an integrator of branching signals within axillary buds."
    Aguilar-Martinez J.A., Poza-Carrion C., Cubas P.
    Plant Cell 19:458-472(2007) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiTCP14_ARATH
AccessioniPrimary (citable) accession number: Q93Z00
Secondary accession number(s): Q9SN76
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 29, 2008
Last sequence update: December 1, 2001
Last modified: June 11, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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