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Q93YU2 (Q93YU2_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 45. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative uncharacterized protein At5g49820 EMBL AAL24114.1
Submitted name:
Uncharacterized protein EMBL AED95859.1
Gene names
Name:EMB1879 EMBL AED95859.1
Ordered Locus Names:At5g49820 TAIR At5g49820
ORF Names:AT5G49820 EMBL AED95859.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAL24114.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length497 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
Q93YU2 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: E5CD6D7C29DA5981

FASTA49754,628
        10         20         30         40         50         60 
MPSVKLTHHS PPDTIASDSV RLLSRETLRI SASLASPPVD DLPPHSPPPP DSQFLHSTLR 

        70         80         90        100        110        120 
LICCEEIDGR RFKYVAESDG SGRFKKNSVR AISLESPQTP FDEVGSFLRS YVVPEGFPGS 

       130        140        150        160        170        180 
VNESYVPYMT WRALKHFFGG AMGVFTTQTL LNSVGASRNS SASAAVAINW ILKDGAGRVG 

       190        200        210        220        230        240 
KMLFARQGKK FDYDLKQLRF AGDLLMELGA GVELATAAVP HLFLPLACAA NVVKNVAAVT 

       250        260        270        280        290        300 
STSTRTPIYK AFAKGENIGD VTAKGECVGN IADLMGTGFS ILISKRNPSL VTTFGLLSCG 

       310        320        330        340        350        360 
YLMSSYQEVR SVVLHTLNRA RFTVAVESFL KTGRVPSLQE GNIQEKIFTF PWVDDRPVML 

       370        380        390        400        410        420 
GARFKDAFQD PSTYMAVKPF FDKERYMVTY SPTKGKVYAL LKHQANSDDI LKAAFHAHVL 

       430        440        450        460        470        480 
LHFMNQSKDG NPRSVEQLDP AFAPTEYELE SRIAESCEMV STSYGVFKSR AAEQGWRMSE 

       490 
SLLNPGRARL CHVKEGE

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana."
Kazusa DNA Research Institute, Cold Spring Harbor and Washington University in St Louis Sequencing Consortium, European Union Arabidopsis Genome Sequencing Consortium
Tabata S., Kaneko T., Nakamura Y., Kotani H., Kato T., Asamizu E., Miyajima N., Sasamoto S., Kimura T., Hosouchi T., Kawashima K., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Naruo K. expand/collapse author list , Okumura S., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Sato S., de la Bastide M., Huang E., Spiegel L., Gnoj L., O'Shaughnessy A., Preston R., Habermann K., Murray J., Johnson D., Rohlfing T., Nelson J., Stoneking T., Pepin K., Spieth J., Sekhon M., Armstrong J., Becker M., Belter E., Cordum H., Cordes M., Courtney L., Courtney W., Dante M., Du H., Edwards J., Fryman J., Haakensen B., Lamar E., Latreille P., Leonard S., Meyer R., Mulvaney E., Ozersky P., Riley A., Strowmatt C., Wagner-McPherson C., Wollam A., Yoakum M., Bell M., Dedhia N., Parnell L., Shah R., Rodriguez M., Hoon See L., Vil D., Baker J., Kirchoff K., Toth K., King L., Bahret A., Miller B., Marra M.A., Martienssen R., McCombie W.R., Wilson R.K., Murphy G., Bancroft I., Volckaert G., Wambutt R., Duesterhoeft A., Stiekema W., Pohl T., Entian K.-D., Terryn N., Hartley N., Bent E., Johnson S., Langham S.-A., McCullagh B., Robben J., Grymonprez B., Zimmermann W., Ramsperger U., Wedler H., Balke K., Wedler E., Peters S., van Staveren M., Dirkse W., Mooijman P., Klein Lankhorst R., Weitzenegger T., Bothe G., Rose M., Hauf J., Berneiser S., Hempel S., Feldpausch M., Lamberth S., Villarroel R., Gielen J., Ardiles W., Bents O., Lemcke K., Kolesov G., Mayer K.F.X., Rudd S., Schoof H., Schueller C., Zaccaria P., Mewes H.-W., Bevan M., Fransz P.F.
Nature 408:823-826(2000) [PubMed: 11130714] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]"Arabidopsis Open Reading Frame (ORF) Clones."
Yamada K., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hsuan V.W., Lee J.M., Quach H.L., Tang C., Toriumi M., Wallender E.K., Wong C., Wu H.C., Yu G., Yuan S., Carninci P., Chen H., Cheuk R. expand/collapse author list , Hayashizaki Y., Ishida J., Jones T., Kamiya A., Kawai J., Kim C.J., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Tripp M.G., Wu T., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (AUG-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]"Arabidopsis Full Length cDNA Clones."
Yamada K., Liu S.X., Sakano H., Pham P.K., Banh J., Chung M.K., Goldsmith A.D., Lee J.M., Quach H.L., Toriumi M., Yu G., Bowser L., Carninci P., Chen H., Cheuk R., Hayashizaki Y., Ishida J., Jones T. expand/collapse author list , Kamiya A., Karlin-Neumann G., Kawai J., Kim C., Lam B., Lin J., Miranda M., Narusaka M., Nguyen M., Palm C.J., Sakurai T., Satou M., Seki M., Shinn P., Southwick A., Shinozaki K., Davis R.W., Ecker J.R., Theologis A.
Submitted (OCT-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AY059766 mRNA. Translation: AAL24114.1.
AY142582 mRNA. Translation: AAN13151.1.
CP002688 Genomic DNA. Translation: AED95859.1.
IPIIPI00527623.
RefSeqNP_568713.1. NM_124360.3.
UniGeneAt.21512.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

IntActQ93YU2. 2 interactions.

Proteomic databases

PRIDEQ93YU2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT5G49820.1; AT5G49820.1; AT5G49820.
GeneID835045.
GenomeReviewsGene locus AT5G49820 in contig BA000015_GR.
KEGGath:AT5G49820.
NMPDRfig|3702.1.peg.26829.

Organism-specific databases

TAIRAt5g49820.

Phylogenomic databases

eggNOGKOG4249.
HOGENOMHBG316992.
InParanoidQ93YU2.
OMASILISKR.
PhylomeDBQ93YU2.
ProtClustDBCLSN2689965.

Gene expression databases

ArrayExpressQ93YU2.
GenevestigatorQ93YU2.

Family and domain databases

InterProIPR006968. DUF647.
[Graphical view]
PANTHERPTHR12770. DUF647. 1 hit.
PfamPF04884. DUF647. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ93YU2_ARATH
AccessionPrimary (citable) accession number: Q93YU2
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: January 25, 2012
This is version 45 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry info