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Protein

Endoglucanase 24

Gene

At4g39010

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei414By similarity1
Active sitei465By similarity1
Active sitei474By similarity1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidase, Hydrolase
Biological processCarbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Enzyme and pathway databases

BioCyciARA:AT4G39010-MONOMER

Protein family/group databases

CAZyiGH9 Glycoside Hydrolase Family 9

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 24 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 24
Gene namesi
Ordered Locus Names:At4g39010
ORF Names:F19H22.110
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G39010
TAIRilocus:2120242 AT4G39010

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 24Sequence analysisAdd BLAST24
ChainiPRO_000024927625 – 497Endoglucanase 24Add BLAST473

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Glycosylationi440N-linked (GlcNAc...) asparagineSequence analysis1

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ93YQ7
PRIDEiQ93YQ7

Expressioni

Gene expression databases

ExpressionAtlasiQ93YQ7 baseline and differential
GenevisibleiQ93YQ7 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT4G39010.1

Structurei

3D structure databases

ProteinModelPortaliQ93YQ7
SMRiQ93YQ7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG410IJ4G Eukaryota
ENOG410YC2H LUCA
HOGENOMiHOG000021033
InParanoidiQ93YQ7
KOiK01179
OMAiNQHDYSD
OrthoDBiEOG093608GU
PhylomeDBiQ93YQ7

Family and domain databases

Gene3Di1.50.10.10, 1 hit
InterProiView protein in InterPro
IPR008928 6-hairpin_glycosidase_sf
IPR012341 6hp_glycosidase-like_sf
IPR001701 Glyco_hydro_9
IPR033126 Glyco_hydro_9_Asp/Glu_AS
IPR018221 Glyco_hydro_9_His_AS
PfamiView protein in Pfam
PF00759 Glyco_hydro_9, 1 hit
SUPFAMiSSF48208 SSF48208, 1 hit
PROSITEiView protein in PROSITE
PS00592 GLYCOSYL_HYDROL_F9_1, 1 hit
PS00698 GLYCOSYL_HYDROL_F9_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q93YQ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKLHLHPLSL VFFFFFFFFR PTMSSNQHDY SDALSKSILF FEGQRSGYLP
60 70 80 90 100
NDQRMTWRRN SGLSDGWTHN IDLTGGYYDA GDNVKFNFPM AFTTTMLAWS
110 120 130 140 150
VIEFGEFMPS SELRNSLVAL RWSSNYLLKS VSQLPNRIFV QVGDPIADHN
160 170 180 190 200
CWERPEDMDT PRTAYAVNAP NPASEVAGET TAALSAASIA FRSSDPGYSQ
210 220 230 240 250
TLLQNAVKTF QFADMYRGAY SSNDDIKNDV CPFYCDFNGF QDELLWGAAW
260 270 280 290 300
LRKATGDESY LNYIESNREP FGANDNVDEF GWDNKVGGLN VLVSKEVIEG
310 320 330 340 350
NMYNLEAYKA SAESFMCSLV PESSGPHVEY TSAGLLYKPG GSQLQHATTI
360 370 380 390 400
SFLLLVYAQY LSRSSLSLNC GTLTVPPDYL RRLAKKQVDY ILGNNPMGLS
410 420 430 440 450
YMVGYGERYP KRIHHRGSSL PSIVDHPEAI RCKDGSVYFN STEPNPNVLI
460 470 480 490
GAVVGGPGED DMYDDDRSDF RKSEPTTYIN APFVGVLAYF AANPGSS
Length:497
Mass (Da):55,495
Last modified:December 1, 2001 - v1
Checksum:i1F3EC2493D36BDDD
GO

Sequence cautioni

The sequence CAB38821 differs from that shown. Reason: Erroneous initiation.Curated
The sequence CAB80564 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL035679 Genomic DNA Translation: CAB38821.1 Different initiation.
AL161594 Genomic DNA Translation: CAB80564.1 Different initiation.
CP002687 Genomic DNA Translation: AEE87007.1
AY059825 mRNA Translation: AAL24307.1
BT002204 mRNA Translation: AAN72215.1
PIRiT06061
RefSeqiNP_568050.1, NM_120061.2
UniGeneiAt.26609
At.67360

Genome annotation databases

EnsemblPlantsiAT4G39010.1; AT4G39010.1; AT4G39010
GeneIDi830056
GrameneiAT4G39010.1; AT4G39010.1; AT4G39010
KEGGiath:AT4G39010

Similar proteinsi

Entry informationi

Entry nameiGUN24_ARATH
AccessioniPrimary (citable) accession number: Q93YQ7
Secondary accession number(s): Q9SVJ2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: December 1, 2001
Last modified: May 23, 2018
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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