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Protein

Sugar transporter ERD6-like 4

Gene

At1g19450

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Sugar transporter.Curated

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Sugar transport, Transport

Enzyme and pathway databases

ReactomeiR-ATH-428790. Facilitative Na+-independent glucose transporters.

Names & Taxonomyi

Protein namesi
Recommended name:
Sugar transporter ERD6-like 4
Gene namesi
Ordered Locus Names:At1g19450
ORF Names:F18O14.22
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G19450.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei47 – 6721Helical; Name=1Sequence analysisAdd
BLAST
Transmembranei90 – 11021Helical; Name=2Sequence analysisAdd
BLAST
Transmembranei116 – 13621Helical; Name=3Sequence analysisAdd
BLAST
Transmembranei147 – 16721Helical; Name=4Sequence analysisAdd
BLAST
Transmembranei179 – 19921Helical; Name=5Sequence analysisAdd
BLAST
Transmembranei202 – 22221Helical; Name=6Sequence analysisAdd
BLAST
Transmembranei285 – 30521Helical; Name=7Sequence analysisAdd
BLAST
Transmembranei321 – 34121Helical; Name=8Sequence analysisAdd
BLAST
Transmembranei348 – 36821Helical; Name=9Sequence analysisAdd
BLAST
Transmembranei390 – 41021Helical; Name=10Sequence analysisAdd
BLAST
Transmembranei426 – 44621Helical; Name=11Sequence analysisAdd
BLAST
Transmembranei452 – 47221Helical; Name=12Sequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of plasma membrane Source: GO_Central
  • vacuolar membrane Source: TAIR
  • vacuole Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 488488Sugar transporter ERD6-like 4PRO_0000259854Add
BLAST

Proteomic databases

PaxDbiQ93YP9.
PRIDEiQ93YP9.

PTM databases

iPTMnetiQ93YP9.

Expressioni

Gene expression databases

GenevisibleiQ93YP9. AT.

Interactioni

Protein-protein interaction databases

BioGridi23768. 16 interactions.
IntActiQ93YP9. 2 interactions.
STRINGi3702.AT1G19450.1.

Structurei

3D structure databases

ProteinModelPortaliQ93YP9.
SMRiQ93YP9. Positions 50-487.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiKOG0254. Eukaryota.
ENOG410XNQK. LUCA.
HOGENOMiHOG000202868.
InParanoidiQ93YP9.
OMAiSNMYNIL.
PhylomeDBiQ93YP9.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
IPR003663. Sugar/inositol_transpt.
IPR005829. Sugar_transporter_CS.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
PRINTSiPR00171. SUGRTRNSPORT.
SUPFAMiSSF103473. SSF103473. 2 hits.
TIGRFAMsiTIGR00879. SP. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
PS00216. SUGAR_TRANSPORT_1. 1 hit.
PS00217. SUGAR_TRANSPORT_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q93YP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFRDDNTEE GRNDLRRPFL HTGSWYRMGS RQSSMLESSQ VIRDSSISVL
60 70 80 90 100
ACVLIVALGP IQFGFTCGYS SPTQAAITKD LGLTVSEYSV FGSLSNVGAM
110 120 130 140 150
VGAIASGQIA EYVGRKGSLM IAAIPNIIGW LSISFAKDTS FLYMGRLLEG
160 170 180 190 200
FGVGIISYTV PVYIAEIAPQ TMRGALGSVN QLSVTIGIML AYLLGLFVPW
210 220 230 240 250
RILAVLGVLP CTLLIPGLFF IPESPRWLAK MGLTDDFETS LQVLRGFETD
260 270 280 290 300
ITVEVNEIKR SVASSSKRSA VRFVDLKRRR YYFPLMVGIG LLALQQLGGI
310 320 330 340 350
NGVLFYSSTI FESAGVTSSN VATFGVGVVQ VVATGIATWL VDKAGRRLLL
360 370 380 390 400
MISSIGMTIS LVIVAVAFYL KEFVSPDSNM YNILSMVSVV GVVAMVISCS
410 420 430 440 450
LGMGPIPWLI MSEILPVNIK GLAGSIATLL NWFVSWLVTM TANMLLAWSS
460 470 480
GGTFTLYALV CGFTVVFVSL WVPETKGKTL EEIQALFR
Length:488
Mass (Da):52,787
Last modified:December 1, 2001 - v1
Checksum:i8EC5BD62AF6BAD18
GO

Sequence cautioni

The sequence AAF79445.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC025808 Genomic DNA. Translation: AAF79445.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE29853.1.
AY059848 mRNA. Translation: AAL24330.1.
AY093274 mRNA. Translation: AAM13273.1.
RefSeqiNP_173377.1. NM_101801.2.
UniGeneiAt.22941.

Genome annotation databases

EnsemblPlantsiAT1G19450.1; AT1G19450.1; AT1G19450.
GeneIDi838529.
GrameneiAT1G19450.1; AT1G19450.1; AT1G19450.
KEGGiath:AT1G19450.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC025808 Genomic DNA. Translation: AAF79445.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE29853.1.
AY059848 mRNA. Translation: AAL24330.1.
AY093274 mRNA. Translation: AAM13273.1.
RefSeqiNP_173377.1. NM_101801.2.
UniGeneiAt.22941.

3D structure databases

ProteinModelPortaliQ93YP9.
SMRiQ93YP9. Positions 50-487.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi23768. 16 interactions.
IntActiQ93YP9. 2 interactions.
STRINGi3702.AT1G19450.1.

PTM databases

iPTMnetiQ93YP9.

Proteomic databases

PaxDbiQ93YP9.
PRIDEiQ93YP9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G19450.1; AT1G19450.1; AT1G19450.
GeneIDi838529.
GrameneiAT1G19450.1; AT1G19450.1; AT1G19450.
KEGGiath:AT1G19450.

Organism-specific databases

TAIRiAT1G19450.

Phylogenomic databases

eggNOGiKOG0254. Eukaryota.
ENOG410XNQK. LUCA.
HOGENOMiHOG000202868.
InParanoidiQ93YP9.
OMAiSNMYNIL.
PhylomeDBiQ93YP9.

Enzyme and pathway databases

ReactomeiR-ATH-428790. Facilitative Na+-independent glucose transporters.

Miscellaneous databases

PROiQ93YP9.

Gene expression databases

GenevisibleiQ93YP9. AT.

Family and domain databases

InterProiIPR020846. MFS_dom.
IPR005828. MFS_sugar_transport_like.
IPR003663. Sugar/inositol_transpt.
IPR005829. Sugar_transporter_CS.
[Graphical view]
PfamiPF00083. Sugar_tr. 1 hit.
[Graphical view]
PRINTSiPR00171. SUGRTRNSPORT.
SUPFAMiSSF103473. SSF103473. 2 hits.
TIGRFAMsiTIGR00879. SP. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
PS00216. SUGAR_TRANSPORT_1. 1 hit.
PS00217. SUGAR_TRANSPORT_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. "Empirical analysis of transcriptional activity in the Arabidopsis genome."
    Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G.
    , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
    Science 302:842-846(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Columbia.
  4. "The monosaccharide transporter gene family in land plants is ancient and shows differential subfamily expression and expansion across lineages."
    Johnson D.A., Hill J.P., Thomas M.A.
    BMC Evol. Biol. 6:64-64(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENE FAMILY.

Entry informationi

Entry nameiERDL4_ARATH
AccessioniPrimary (citable) accession number: Q93YP9
Secondary accession number(s): Q9LN48
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 28, 2006
Last sequence update: December 1, 2001
Last modified: July 6, 2016
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.