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Q93X68 (FABG5_BRANA) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
3-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic

EC=1.1.1.100
Alternative name(s):
3-ketoacyl-acyl carrier protein reductase 5
Gene names
Name:bkr1
OrganismBrassica napus (Rape)
Taxonomic identifier3708 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeBrassiceaeBrassica

Protein attributes

Sequence length317 AA.
Sequence statusFragment.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceEvidence at transcript level

General annotation (Comments)

Catalytic activity

(3R)-3-hydroxyacyl-[acyl-carrier-protein] + NADP+ = 3-oxoacyl-[acyl-carrier-protein] + NADPH.

Pathway

Lipid metabolism; fatty acid biosynthesis.

Subunit structure

Homotetramer By similarity.

Subcellular location

Plastidchloroplast By similarity. Plastid By similarity. Note: And non-photosynthetic plastids By similarity.

Sequence similarities

Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Ontologies

Keywords
   Biological processFatty acid biosynthesis
Fatty acid metabolism
Lipid biosynthesis
Lipid metabolism
   Cellular componentChloroplast
Plastid
   DomainTransit peptide
   LigandNADP
   Molecular functionOxidoreductase
Gene Ontology (GO)
   Biological_processfatty acid biosynthetic process

Inferred from electronic annotation. Source: UniProtKB-UniPathway

   Cellular_componentchloroplast

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_function3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity

Inferred from electronic annotation. Source: UniProtKB-EC

NAD binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Transit peptide‹1 – 57›57Chloroplast Potential
Chain58 – 3172603-oxoacyl-[acyl-carrier-protein] reductase 5, chloroplastic
PRO_0000031980

Regions

Nucleotide binding79 – 10325NADP By similarity

Sites

Active site2241Proton acceptor By similarity
Binding site2111Substrate By similarity

Experimental info

Non-terminal residue11

Sequences

Sequence LengthMass (Da)Tools
Q93X68 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 3701327C50ED7104

FASTA31733,491
        10         20         30         40         50         60 
TTVAATKLTS LKATAGKLGY REICQVRQWA PLKSAMPHFG MLRCATSTVV KAQAQAQATA 

        70         80         90        100        110        120 
TEQTTEEAVP KVESPVVVVT GASRGIGKAI ALSLGKAGCK VLVNYARSAK EAEEVSKQIE 

       130        140        150        160        170        180 
EYGGEAITFG GDVSKEADVD SMMKTAVDKW GTIDVVVNNA GITRDTLLIR MKKSQWDEVI 

       190        200        210        220        230        240 
DLNLTGVFLC TQAATKIMMK KRKGRIINIA SVVGLIGNIG QANYAAAKAG VIGFSKTAAR 

       250        260        270        280        290        300 
EGASRNINVN VVCPGFIASD MTAKLGEDME KKILGTIPLG RYGQPEYVAG LVEFLALSPA 

       310 
SSYITGHTFS IHGGFAI 

« Hide

References

[1]McDonald F.S., White A.J., Elborough K.M., Slabas A.R.
Submitted (JUN-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [MRNA].
Strain: cv. Jet neuf.
Tissue: Embryo.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AJ243083 mRNA. Translation: CAC41362.1.

3D structure databases

ProteinModelPortalQ93X68.
SMRQ93X68. Positions 74-317.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Enzyme and pathway databases

UniPathwayUPA00094.

Family and domain databases

Gene3D3.40.50.720. 1 hit.
InterProIPR011284. 3oxo_ACP_reduc.
IPR002198. DH_sc/Rdtase_SDR.
IPR002347. Glc/ribitol_DH.
IPR016040. NAD(P)-bd_dom.
IPR020904. Sc_DH/Rdtase_CS.
[Graphical view]
PfamPF00106. adh_short. 1 hit.
[Graphical view]
PIRSFPIRSF000126. 11-beta-HSD1. 1 hit.
PRINTSPR00081. GDHRDH.
PR00080. SDRFAMILY.
TIGRFAMsTIGR01830. 3oxo_ACP_reduc. 1 hit.
PROSITEPS00061. ADH_SHORT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameFABG5_BRANA
AccessionPrimary (citable) accession number: Q93X68
Entry history
Integrated into UniProtKB/Swiss-Prot: January 4, 2005
Last sequence update: December 1, 2001
Last modified: February 19, 2014
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways