Q93WY5 (Q93WY5_ORYSJ) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 83.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Submitted name: Os09g0467200 protein EMBL BAF25337.1 Submitted name: Putative glutathione S-transferase EMBL BAD17523.1 Submitted name: Putative glutathione S-transferase OsGSTU17 EMBL AAK98545.1 Submitted name: cDNA clone:001-002-F11, full insert sequence EMBL BAG87373.1 Submitted name: cDNA clone:001-040-D11, full insert sequence EMBL BAG88140.1 Submitted name: cDNA clone:J013026J15, full insert sequence EMBL BAG94156.1 | ||||||
| Gene names |
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| Organism | Oryza sativa subsp. japonica (Rice) [Reference proteome] EMBL AAK98545.1 | ||||||
| Taxonomic identifier | 39947 [NCBI] | ||||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza › ![]() |
Protein attributes
| Sequence length | 223 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Sequence similarities | Belongs to the GST superfamily. RuleBase RU003494 Contains 1 GST C-terminal domain. SAAS SAAS004045 Contains 1 GST N-terminal domain. SAAS SAAS004045 |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Transferase EMBL AAK98545.1 |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Molecular_function | transferase activity Inferred from electronic annotation. Source: UniProtKB-KW |
| Complete GO annotation... | |
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 9, PAC clone:P0676H02." Sasaki T., Matsumoto T., Katayose Y. Submitted (JUN-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [2] | "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 9, BAC clone:OJ1005_D12." Sasaki T., Matsumoto T., Hattori M., Sakaki Y., Katayose Y. Submitted (SEP-2002) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [3] | "Collection, Mapping, and Annotation of Over 28,000 cDNA Clones from japonica Rice." Kikuchi S., Satoh K., Nagata T., Kawagashira N., Doi K., Kishimoto N., Yazaki J., Ishikawa M., Yamada H., Ooka H., Hotta I., Kojima K., Namiki T., Ohneda E., Yahagi W., Suzuki K., Li C., Ohtsuki K. Hayashizaki Y.Science 301:376-379(2003) Cited for: NUCLEOTIDE SEQUENCE. |
| [4] | "Organisation and structural evolution of the rice glutathione S-transferase gene family." Soranzo N., Sari Gorla M., Mizzi L., De Toma G., Frova C. Mol. Genet. Genomics 271:511-521(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Tissue: Flowering panicle EMBL AAK98545.1. |
| [5] | "The map-based sequence of the rice genome." International Rice Genome Sequencing Project Matsumoto T., Wu J., Kanamori H., Katayose Y., Fujisawa M., Namiki N., Mizuno H., Yamamoto K., Antonio B.A., Baba T., Sakata K., Nagamura Y., Aoki H., Arikawa K., Arita K., Bito T., Chiden Y., Fujitsuka N. Sasaki T.Nature 436:793-800(2005) Cited for: NUCLEOTIDE SEQUENCE. |
| [6] | "The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [7] | "The Genomes of Oryza sativa: A History of Duplications." Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. Yang H.PLoS Biol. 3:E38-E38(2005) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [8] | "Oryza sativa nipponbare(GA3) genomic DNA, chromosome 9." IRGSP(International Rice Genome Sequencing Project) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [9] | "The Second Rice Annotation Project Meeting (RAP2)." The Rice Annotation Project (RAP) Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [10] | "The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information." Ohyanagi H., Tanaka T., Sakai H., Shigemoto Y., Yamaguchi K., Habara T., Fujii Y., Antonio B.A., Nagamura Y., Imanishi T., Ikeo K., Itoh T., Gojobori T., Sasaki T. Nucleic Acids Res. 34:D741-D744(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. |
| [11] | "Improved gene annotation of the rice (Oryza sativa) genomes." Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J., Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R., Kristiansen K., Wong G.K.-S. Submitted (SEP-2006) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
| [12] | "Curated Genome Annotation of Oryza sativa ssp. japonica and Comparative Genome Analysis with Arabidopsis thaliana." The Rice Annotation Project (RAP) Itoh T., Tanaka T., Barrero R.A., Yamasaki C., Fujii Y., Hilton P.B., Antonio B.A., Aono H., Apweiler R., Bruskiewich R., Bureau T., Burr F., Costa de Oliveira A., Fuks G., Habara T., Haberer G., Han B., Harada E. Sasaki T.Genome Res. 17:175-183(2007) Cited for: NUCLEOTIDE SEQUENCE. |
| [13] | "The rice annotation project database (RAP-DB): 2008 update." The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare. |
| [14] | "The Rice Annotation Project Database (RAP-DB): 2008 update." The Rice Annotation Project (RAP) Tanaka T., Antonio B.A., Kikuchi S., Matsumoto T., Nagamura Y., Numa H., Sakai H., Wu J., Itoh T., Sasaki T., Aono R., Fujii Y., Habara T., Harada E., Kanno M., Kawahara Y., Kawashima H., Kubooka H. Echeverria M.Nucleic Acids Res. 36:D1028-D1033(2008) Cited for: NUCLEOTIDE SEQUENCE. |
| [15] | Wang J., Li R., Fan W., Huang Q., Zhang J., Zhou Y., Hu Y., Zi S., Li J., Ni P., Zheng H., Zhang Y., Zhao M., Hao Q., McDermott J., Samudrala R., Kristiansen K., Wong G.K.-S. Submitted (DEC-2008) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AF402804 mRNA. Translation: AAK98545.1. AP005676 Genomic DNA. Translation: BAD17523.1. AP005399 Genomic DNA. Translation: BAD19734.1. AP008215 Genomic DNA. Translation: BAF25337.1. AK060223 mRNA. Translation: BAG87373.1. AK061838 mRNA. Translation: BAG88140.1. AK099489 mRNA. Translation: BAG94156.1. CM000146 Genomic DNA. Translation: EAZ45045.1. |
| RefSeq | NP_001063423.1. NM_001069958.1. |
| UniGene | Os.11962. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1OYJ based on UniProtKB O65032. |
| ModBase | Search... |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblPlants | LOC_Os09g29200.1; LOC_Os09g29200.1; LOC_Os09g29200. |
| GeneID | 4347319. |
| KEGG | osa:4347319. |
Phylogenomic databases | |
| eggNOG | COG0625. |
| KO | K00799. |
| OMA | IRVEWAL. |
| ProtClustDB | CLSN2697791. |
Family and domain databases | |
| Gene3D | 1.20.1050.10. 1 hit. 3.40.30.10. 1 hit. |
| InterPro | IPR010987. Glutathione-S-Trfase_C-like. IPR004045. Glutathione_S-Trfase_N. IPR017933. Glutathione_S_Trfase/Cl_chnl_C. IPR004046. GST_C. IPR012336. Thioredoxin-like_fold. [Graphical view] |
| Pfam | PF00043. GST_C. 1 hit. [Graphical view] |
| SUPFAM | SSF47616. GST_C_like. 1 hit. SSF52833. Thiordxn-like_fd. 1 hit. |
| PROSITE | PS50405. GST_CTER. 1 hit. PS50404. GST_NTER. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q93WY5_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q93WY5 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
