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Q93UZ0 (RBLL_ALLVD) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 53. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Ribulose bisphosphate carboxylase-like protein
Short name=RuBisCO-like protein
Gene names
Ordered Locus Names:Alvin_2545
ORF Names:ORF457
OrganismAllochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) (Chromatium vinosum) [Complete proteome] [HAMAP]
Taxonomic identifier572477 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Chromatiales › Chromatiaceae › Allochromatium ›

Protein attributes

Sequence length457 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity By similarity.

Cofactor

Binds 1 magnesium ion per subunit By similarity.

Sequence similarities

Belongs to the RuBisCO large chain family. Type IV subfamily.

Ontologies

Keywords
   LigandMagnesium
Metal-binding
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbon fixation

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmagnesium ion binding

Inferred from electronic annotation. Source: InterPro

ribulose-bisphosphate carboxylase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 457457Ribulose bisphosphate carboxylase-like protein
PRO_0000062681

Sites

Metal binding1991Magnesium; via carbamate group Potential
Metal binding2011Magnesium By similarity
Metal binding2021Magnesium By similarity

Amino acid modifications

Modified residue1991N6-carboxylysine Potential

Sequences

Sequence LengthMass (Da)Tools
Q93UZ0 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 42CD47B503185D38

FASTA45749,562
        10         20         30         40         50         60 
MTASDWAGFF ADEASLDREA YLFLDYYLEC SGDPELAAAH FCSEQSTAQW RRVGSDEDLR 

        70         80         90        100        110        120 
PRFGARVVDL QILDGARPEF SYGVGSGSDA PVTACRLRIA HPHGNFGPRL PNLLSAICGE 

       130        140        150        160        170        180 
GTFFSPGAPI VKLLDIEFPE SYLACFQGPQ FGVAGLRERL QVHDRPIFFG VIKPNIGLPP 

       190        200        210        220        230        240 
EAFSELGHES WLGGLDIAKD DEMLADTDWC PLDRRAELLG EARRRAEAAT GVPKIYLANI 

       250        260        270        280        290        300 
TDEVDRLVEL HDRAVERGAN ALLINAMPTG LSAVRMLRKH AQVPLMAHFP FIAPFARLER 

       310        320        330        340        350        360 
FGVHTRVFTK LQRLAGYDVI IMPGFGPRMH MTDDEVRACA TACLEPMGPI KPSLPVPGGS 

       370        380        390        400        410        420 
DWAGTLRPLY EKLGTVDFGF VPGRGVFGHP MGPRAGAASI RQAWEAIVAG ETLEERAKRH 

       430        440        450 
PELSAAIAAF GKPAHGQAAS PQPSEQASEP DAAGGDS

« Hide

References

« Hide 'large scale' references
[1]"Transcription of three sets of genes coding for the core light-harvesting proteins in the purple sulfur bacterium, Allochromatium vinosum."
Nagashima S., Shimada K., Matsuura K., Nagashima K.V.P.
Photosyn. Res. 74:269-280(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Complete sequence of chromosome of Allochromatium vinosum DSM 180."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Zigann R., Dahl C., Woyke T.
Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 17899 / DSM 180 / NBRC 103801 / D.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AB050620 Genomic DNA. Translation: BAB44150.1.
CP001896 Genomic DNA. Translation: ADC63455.1.
RefSeqYP_003444487.1. NC_013851.1.

3D structure databases

ProteinModelPortalQ93UZ0.
SMRQ93UZ0. Positions 1-430.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaADC63455; ADC63455; Alvin_2545.
GeneID8787927.
KEGGalv:Alvin_2545.
PATRIC31924862. VBIAllVin64954_2510.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000230831.
KOK01601.
ProtClustDBCLSK637929.

Family and domain databases

Gene3D3.20.20.110. 1 hit.
3.30.70.150. 1 hit.
InterProIPR000685. RuBisCO_lsu_C.
IPR017443. RuBisCO_lsu_fd_N.
[Graphical view]
PfamPF00016. RuBisCO_large. 2 hits.
[Graphical view]
SUPFAMSSF51649. RuBisCO_large. 1 hit.
SSF54966. RuBisCO_large. 1 hit.
PROSITEPS00157. RUBISCO_LARGE. False negative.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRBLL_ALLVD
AccessionPrimary (citable) accession number: Q93UZ0
Secondary accession number(s): D3RP65
Entry history
Integrated into UniProtKB/Swiss-Prot: November 8, 2005
Last sequence update: December 1, 2001
Last modified: May 1, 2013
This is version 53 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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