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Q93UZ0

- RBLL_ALLVD

UniProt

Q93UZ0 - RBLL_ALLVD

Protein

Ribulose bisphosphate carboxylase-like protein

Gene

Alvin_2545

Organism
Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) (Chromatium vinosum)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 59 (01 Oct 2014)
      Sequence version 1 (01 Dec 2001)
      Previous versions | rss
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    Functioni

    May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity By similarity.By similarity

    Cofactori

    Binds 1 magnesium ion per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi199 – 1991Magnesium; via carbamate groupSequence Analysis
    Metal bindingi201 – 2011MagnesiumBy similarity
    Metal bindingi202 – 2021MagnesiumBy similarity

    GO - Molecular functioni

    1. magnesium ion binding Source: InterPro
    2. ribulose-bisphosphate carboxylase activity Source: InterPro

    GO - Biological processi

    1. carbon fixation Source: InterPro

    Keywords - Ligandi

    Magnesium, Metal-binding

    Enzyme and pathway databases

    BioCyciAVIN572477:GCJK-2600-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribulose bisphosphate carboxylase-like protein
    Short name:
    RuBisCO-like protein
    Gene namesi
    Ordered Locus Names:Alvin_2545
    ORF Names:ORF457
    OrganismiAllochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) (Chromatium vinosum)
    Taxonomic identifieri572477 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaChromatialesChromatiaceaeAllochromatium
    ProteomesiUP000001441: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 457457Ribulose bisphosphate carboxylase-like proteinPRO_0000062681Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei199 – 1991N6-carboxylysineSequence Analysis

    Structurei

    3D structure databases

    ProteinModelPortaliQ93UZ0.
    SMRiQ93UZ0. Positions 1-430.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    HOGENOMiHOG000230831.
    KOiK01601.

    Family and domain databases

    Gene3Di3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProiIPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view]
    PfamiPF00016. RuBisCO_large. 2 hits.
    [Graphical view]
    SUPFAMiSSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q93UZ0-1 [UniParc]FASTAAdd to Basket

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    MTASDWAGFF ADEASLDREA YLFLDYYLEC SGDPELAAAH FCSEQSTAQW    50
    RRVGSDEDLR PRFGARVVDL QILDGARPEF SYGVGSGSDA PVTACRLRIA 100
    HPHGNFGPRL PNLLSAICGE GTFFSPGAPI VKLLDIEFPE SYLACFQGPQ 150
    FGVAGLRERL QVHDRPIFFG VIKPNIGLPP EAFSELGHES WLGGLDIAKD 200
    DEMLADTDWC PLDRRAELLG EARRRAEAAT GVPKIYLANI TDEVDRLVEL 250
    HDRAVERGAN ALLINAMPTG LSAVRMLRKH AQVPLMAHFP FIAPFARLER 300
    FGVHTRVFTK LQRLAGYDVI IMPGFGPRMH MTDDEVRACA TACLEPMGPI 350
    KPSLPVPGGS DWAGTLRPLY EKLGTVDFGF VPGRGVFGHP MGPRAGAASI 400
    RQAWEAIVAG ETLEERAKRH PELSAAIAAF GKPAHGQAAS PQPSEQASEP 450
    DAAGGDS 457
    Length:457
    Mass (Da):49,562
    Last modified:December 1, 2001 - v1
    Checksum:i42CD47B503185D38
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB050620 Genomic DNA. Translation: BAB44150.1.
    CP001896 Genomic DNA. Translation: ADC63455.1.
    RefSeqiWP_012971724.1. NC_013851.1.
    YP_003444487.1. NC_013851.1.

    Genome annotation databases

    EnsemblBacteriaiADC63455; ADC63455; Alvin_2545.
    GeneIDi8787927.
    KEGGialv:Alvin_2545.
    PATRICi31924862. VBIAllVin64954_2510.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB050620 Genomic DNA. Translation: BAB44150.1 .
    CP001896 Genomic DNA. Translation: ADC63455.1 .
    RefSeqi WP_012971724.1. NC_013851.1.
    YP_003444487.1. NC_013851.1.

    3D structure databases

    ProteinModelPortali Q93UZ0.
    SMRi Q93UZ0. Positions 1-430.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ADC63455 ; ADC63455 ; Alvin_2545 .
    GeneIDi 8787927.
    KEGGi alv:Alvin_2545.
    PATRICi 31924862. VBIAllVin64954_2510.

    Phylogenomic databases

    HOGENOMi HOG000230831.
    KOi K01601.

    Enzyme and pathway databases

    BioCyci AVIN572477:GCJK-2600-MONOMER.

    Family and domain databases

    Gene3Di 3.20.20.110. 1 hit.
    3.30.70.150. 1 hit.
    InterProi IPR000685. RuBisCO_lsu_C.
    IPR017443. RuBisCO_lsu_fd_N.
    [Graphical view ]
    Pfami PF00016. RuBisCO_large. 2 hits.
    [Graphical view ]
    SUPFAMi SSF51649. SSF51649. 1 hit.
    SSF54966. SSF54966. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Transcription of three sets of genes coding for the core light-harvesting proteins in the purple sulfur bacterium, Allochromatium vinosum."
      Nagashima S., Shimada K., Matsuura K., Nagashima K.V.P.
      Photosyn. Res. 74:269-280(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Complete sequence of chromosome of Allochromatium vinosum DSM 180."
      US DOE Joint Genome Institute
      Lucas S., Copeland A., Lapidus A., Cheng J.-F., Bruce D., Goodwin L., Pitluck S., Munk A.C., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Zigann R., Dahl C., Woyke T.
      Submitted (FEB-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 17899 / DSM 180 / NBRC 103801 / D.

    Entry informationi

    Entry nameiRBLL_ALLVD
    AccessioniPrimary (citable) accession number: Q93UZ0
    Secondary accession number(s): D3RP65
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: November 8, 2005
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3