Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Mycodextranase

Gene

myd

Organism
Streptomyces sp. J-13-3
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Protein family/group databases

CAZyiGH87. Glycoside Hydrolase Family 87.

Names & Taxonomyi

Protein namesi
Submitted name:
MycodextranaseImported (EC:3.2.1.61Imported)
Gene namesi
Name:mydImported
OrganismiStreptomyces sp. J-13-3Imported
Taxonomic identifieri151778 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomyces

Structurei

3D structure databases

ProteinModelPortaliQ93R89.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini1 – 5555CBM6 (carbohydrate binding type-6)InterPro annotationAdd
BLAST

Family and domain databases

Gene3Di2.160.20.10. 1 hit.
2.60.120.260. 1 hit.
InterProiIPR005084. CMB_fam6.
IPR008979. Galactose-bd-like.
IPR006626. PbH1.
IPR024535. Pectate_lyase_SF_prot.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
PfamiPF03422. CBM_6. 1 hit.
PF12708. Pectate_lyase_3. 1 hit.
[Graphical view]
SMARTiSM00710. PbH1. 8 hits.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF51126. SSF51126. 1 hit.
PROSITEiPS51175. CBM6. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q93R89-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSSTAQVTL PATSGWASWS TVDVPVSYAK GANTVKLAFT DNDSGNVNID
60 70 80 90 100
HLKATTPTTP ADPGDPTDPD PSGVGATLPF TTYEAEAGSF KGSAIGPDRT
110 120 130 140 150
YLTVASEASG RQAVKLTQTG DYVEVKLTKP ANAINLRYSL PDSSDGKGID
160 170 180 190 200
ATLSAYADGK ALPGLHLTSR YAWVYGAYPY TNNPGEGQGH RFFDETRATF
210 220 230 240 250
GQTLPAGTVL RLQKDTGDTA ASYTLDLIEA EETGSAATLP SGYVSAADLG
260 270 280 290 300
VTPGGQDVTA ALNNALNTAK NQGKGLFLPA GTYKISDHIN LSGVKLRGAG
310 320 330 340 350
VWHTVLRGTG LKGGLFGQGG TSTIENLMID GENTVRDDAG GQAAIEGDFG
360 370 380 390 400
TGSVIKNVWI QHTKVGLWIS GPTTGLKAGD LRIRNTYADG VNLHGAVRDT
410 420 430 440 450
VISNSSIRGT GDDALAMWSD GAAVTNSAFR NNTVQLPSLA NGAAVYGGNG
460 470 480 490 500
NSVENNLISD TVVAAAGITV STRFGEPFSG TTTVSGNLLR RTGSMEVNWN
510 520 530 540 550
TKLGALWVYA DQHDITQPVV LRNNTVEDST YSGLLISWEK QVSDLRVDGL
560 570 580 590 600
TIDRTGANGI EGNAGGKGTF SNTKITGTAE APLNMTGGFT IQRGSGNSGW
Length:600
Mass (Da):62,245
Last modified:December 1, 2001 - v1
Checksum:i0A78E44029D27AA2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB055506 Genomic DNA. Translation: BAB62749.1.
PIRiJC7725.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AB055506 Genomic DNA. Translation: BAB62749.1.
PIRiJC7725.

3D structure databases

ProteinModelPortaliQ93R89.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiGH87. Glycoside Hydrolase Family 87.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.160.20.10. 1 hit.
2.60.120.260. 1 hit.
InterProiIPR005084. CMB_fam6.
IPR008979. Galactose-bd-like.
IPR006626. PbH1.
IPR024535. Pectate_lyase_SF_prot.
IPR012334. Pectin_lyas_fold.
IPR011050. Pectin_lyase_fold/virulence.
[Graphical view]
PfamiPF03422. CBM_6. 1 hit.
PF12708. Pectate_lyase_3. 1 hit.
[Graphical view]
SMARTiSM00710. PbH1. 8 hits.
[Graphical view]
SUPFAMiSSF49785. SSF49785. 1 hit.
SSF51126. SSF51126. 1 hit.
PROSITEiPS51175. CBM6. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Cloning and nucleotide sequence of the mycodextranase gene from Streptomyces sp. J-13-3."
    Okazaki K., Amano T., Morimoto T., Iemoto T., Kawabata T., Hayakawa S., Akimitsu K.
    Biosci. Biotechnol. Biochem. 65:1684-1687(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: J-13-3Imported.

Entry informationi

Entry nameiQ93R89_9ACTN
AccessioniPrimary (citable) accession number: Q93R89
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: July 6, 2016
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.