Q93PC0 (Q93PC0_9BACT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: MS109, putative beta-agarase EMBL AAK62831.1
Encoded on	Plasmid pSD15 EMBL AAK62831.1
Organism	Microscilla sp. PRE1 EMBL AAK62831.1
Taxonomic identifier	155537 [NCBI]
Taxonomic lineage	Bacteria › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Microscilla

Protein attributes

Sequence length	736 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Plasmid EMBL AAK62831.1
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q93PC0 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 94A301F21269E78C	FASTA	736	84,258
	10 20 30 40 50 60 MRIKIWISYG LCFILMIFLG SDILAQKVEV DVQFNVKHVV GNVSMFDRNK FVTIHADVPE 70 80 90 100 110 120 REWEGDNFTT DLRKDFLDRY DVYLGRNTGG ITWYLNNQVT EDPERPGYAN PADVEAIGRN 130 140 150 160 170 180 LKNQYAVNSV WQAYEHRNDQ IIAAQLHPFW PDGQLTNQGW AFSQTDTEVE PFGTATGEYM 190 200 210 220 230 240 GRFIRDAFGE GGTAGQPRPD YVEIINEPVW HLVDYGDESA EKVFRFHNGV AKAIRQTVPD 250 260 270 280 290 300 IQIGGYCTAF PNHETNGFQE WNNRWKLFMD ISGEYMDYWS IHLYDFPSIN NGKQLYRKGS 310 320 330 340 350 360 NMEATFDMME QYSFLKFGEV KPFMISEYGA QMHDYFGAWS PYRDWLHLKS VNSMMLQFME 370 380 390 400 410 420 RPHIINKTIN FLPVKAEWGT KGVNDTYNHR LMRRENEPES YTGQWVYSEL VKTYQLWSEV 430 440 450 460 470 480 NGTRIDTYSP NADILVDGYV EGKNAYLILN NLNFEPAEID LKSHGLSDNN IVSIEIKHLY 490 500 510 520 530 540 LDGDAPVLST SVESSVPESL LLAAEGTMIL ELTMEEPIEP VQSSIEKKYY ADTYLQEIVS 550 560 570 580 590 600 ETPITFNIDN VEVGEYGEAV LRVGIGRQHG KSLAPSVLFN GQNIHVPKNF RGDDQEDRAT 610 620 630 640 650 660 FFGVLEIPVS YDLIKQKNEV QITFSDDGGH VSSVAMQVFN FSVPIERSVG NVLDVPVYDQ 670 680 690 700 710 720 DNIRISPNPN NGWFALEFKE DLSFAVTITD LSGREVFRQS EIKVKEKIDV NYLAPGVYVV 730 AVLNNHTIKS ERIIIR

References

[1]

"Sequence analysis of a 101-kilobase plasmid required for agar degradation by a Microscilla isolate." Zhong Z., Toukdarian A., Helinski D., Knauf V., Sykes S., Wilkinson J.E., O'Bryne C., Shea T., DeLoughery C., Caspi R. Appl. Environ. Microbiol. 67:5771-5779(2001) [PubMed: 11722934] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: PRE1 EMBL AAK62831.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF339846 Genomic DNA. Translation: AAK62831.1.
RefSeq	NP_116797.1. NC_002806.1.
3D structure databases
ProteinModelPortal	Q93PC0.
ModBase	Search...
Protein family/group databases
CAZy	GH86. Glycoside Hydrolase Family 86.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3207660.
Phylogenomic databases
ProtClustDB	CLSK507166.
Family and domain databases
InterPro	IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q93PC0_9BACT

Accession

Primary (citable) accession number: Q93PC0

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	May 31, 2011
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)