Q93PB2 (Q93PB2_9BACT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: MS119, putative fucosidase EMBL AAK62841.1
Encoded on	Plasmid pSD15 EMBL AAK62841.1
Organism	Microscilla sp. PRE1 EMBL AAK62841.1
Taxonomic identifier	155537 [NCBI]
Taxonomic lineage	Bacteria › Bacteroidetes › Cytophagia › Cytophagales › Cytophagaceae › Microscilla

Protein attributes

Sequence length	540 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Plasmid EMBL AAK62841.1
Gene Ontology (GO)
Biological process	fucose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-L-fucosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q93PB2 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 2C7943E3E91BFC37	FASTA	540	62,522
	10 20 30 40 50 60 MMKHKKQMIK SNKFLYLILF VGVFFGGLSL ETTAQKKGEH NLSETTKEVA EQKRKYKEEW 70 80 90 100 110 120 ASIAKHSTPE WFRDAKFGIY THYGPAVNAT QYQQTEWWGW AMYNIKEKYW TNEVRPDSPD 130 140 150 160 170 180 TAKAFKLQLE KWGDPNEFGY KDFIMEFKPT AFDAEEWADL FHKAGAKFAG PMGTHHDNFM 190 200 210 220 230 240 LWDSEVTRWN SVRTAGVDVV GDLEEAIRAK GMKYLITFHH AFSWWFFSES YKYDGGIPGN 250 260 270 280 290 300 EDLYGRPHTF SSDGDSFAEY PDEEYEELWF RKLEEAAIKY SPDLYWFDMG LELLSENIRK 310 320 330 340 350 360 KAFARLLNLA ERNNQEIGIS YKIKFQQCIP TSAGILDYEK GRSKGYREDP WLTDTPLAGW 370 380 390 400 410 420 FYNGRKSRSA EAMIEILVDI VSKNGCLLLN VSPKPDGTIP EDQKKTLLGM GEWLEMNGEA 430 440 450 460 470 480 IYNTRPWVIS GEGPTELAKD DHFNENWEAI YTEQDIRFTR SKDDNTLYLI VLDRPTQGSV 490 500 510 520 530 540 TATLLADIYP YLDRNIQSVK LIGTESSEIS WSRNSKGLHL SFPNTAKGKH AWCYKLQLSE

References

[1]

"Sequence analysis of a 101-kilobase plasmid required for agar degradation by a Microscilla isolate." Zhong Z., Toukdarian A., Helinski D., Knauf V., Sykes S., Wilkinson J.E., O'Bryne C., Shea T., DeLoughery C., Caspi R. Appl. Environ. Microbiol. 67:5771-5779(2001) [PubMed: 11722934] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: PRE1 EMBL AAK62841.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AF339846 Genomic DNA. Translation: AAK62841.1.
RefSeq	NP_116807.1. NC_002806.1.
3D structure databases
ProteinModelPortal	Q93PB2.
ModBase	Search...
Protein family/group databases
CAZy	GH29. Glycoside Hydrolase Family 29.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	3207663.
Phylogenomic databases
ProtClustDB	CLSK507172.
Family and domain databases
InterPro	IPR000933. Glyco_hydro_29. IPR016286. Glyco_hydro_29_sub. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10030. Glyco_hydro_29. 1 hit.
Pfam	PF01120. Alpha_L_fucos. 1 hit. [Graphical view]
PIRSF	PIRSF001092. Alpha-L-fucosidase. 1 hit.
PRINTS	PR00741. GLHYDRLASE29.
SMART	SM00812. Alpha_L_fucos. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q93PB2_9BACT

Accession

Primary (citable) accession number: Q93PB2

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	September 21, 2011
This is version 40 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)