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Unreviewed, UniProtKB/TrEMBL Q93PB2 (Q93PB2_9SPHI)

Last modified June 16, 2009. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    MS119, putative fucosidase EMBL AAK62841.1
Encoded onPlasmid pSD15 EMBL AAK62841.1
OrganismMicroscilla sp. PRE1 EMBL AAK62841.1
Taxonomic identifier155537 [NCBI]
Taxonomic lineageBacteriaBacteroidetesSphingobacteriaSphingobacterialesFlexibacteraceaeMicroscilla

Protein attributes

Sequence length540 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existencePredicted.

Ontologies

Keywords
   Technical termPlasmid
Gene Ontology (GO)
   Biological processfucose metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha-L-fucosidase activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q93PB2-1 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 2C7943E3E91BFC37

FASTA54062,522
        10         20         30         40         50         60 
MMKHKKQMIK SNKFLYLILF VGVFFGGLSL ETTAQKKGEH NLSETTKEVA EQKRKYKEEW 

        70         80         90        100        110        120 
ASIAKHSTPE WFRDAKFGIY THYGPAVNAT QYQQTEWWGW AMYNIKEKYW TNEVRPDSPD 

       130        140        150        160        170        180 
TAKAFKLQLE KWGDPNEFGY KDFIMEFKPT AFDAEEWADL FHKAGAKFAG PMGTHHDNFM 

       190        200        210        220        230        240 
LWDSEVTRWN SVRTAGVDVV GDLEEAIRAK GMKYLITFHH AFSWWFFSES YKYDGGIPGN 

       250        260        270        280        290        300 
EDLYGRPHTF SSDGDSFAEY PDEEYEELWF RKLEEAAIKY SPDLYWFDMG LELLSENIRK 

       310        320        330        340        350        360 
KAFARLLNLA ERNNQEIGIS YKIKFQQCIP TSAGILDYEK GRSKGYREDP WLTDTPLAGW 

       370        380        390        400        410        420 
FYNGRKSRSA EAMIEILVDI VSKNGCLLLN VSPKPDGTIP EDQKKTLLGM GEWLEMNGEA 

       430        440        450        460        470        480 
IYNTRPWVIS GEGPTELAKD DHFNENWEAI YTEQDIRFTR SKDDNTLYLI VLDRPTQGSV 

       490        500        510        520        530        540 
TATLLADIYP YLDRNIQSVK LIGTESSEIS WSRNSKGLHL SFPNTAKGKH AWCYKLQLSE 

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References

[1]"Sequence analysis of a 101-kilobase plasmid required for agar degradation by a Microscilla isolate."
Zhong Z., Toukdarian A., Helinski D., Knauf V., Sykes S., Wilkinson J.E., O'Bryne C., Shea T., DeLoughery C., Caspi R.
Appl. Environ. Microbiol. 67:5771-5779(2001) [PubMed: 11722934] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: PRE1 EMBL AAK62841.1.

Cross-references

Sequence databases

AF339846 Genomic DNA. Translation: AAK62841.1.
RefSeqNP_116807.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGH29. Glycoside Hydrolase Family 29.

Genome annotation databases

GeneID3207663.

Family and domain databases

InterProIPR000933. Glyco_hydro_29.
IPR016286. Glyco_hydro_29_sub.
IPR013781. Glyco_hydro_sg_catalytic.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHERPTHR10030. Glyco_hydro_29. 1 hit.
PfamPF01120. Alpha_L_fucos. 1 hit.
[Graphical view]
PIRSFPIRSF001092. Alpha-L-fucosidase. 1 hit.
PRINTSPR00741. GLHYDRLASE29.
SMARTSM00812. Alpha_L_fucos. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ93PB2_9SPHI
AccessionPrimary (citable) accession number: Q93PB2
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: June 16, 2009
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information