Unreviewed, UniProtKB/TrEMBL Q93PB1 (Q93PB1_9SPHI)

Names and origin

Protein names	Submitted name:     MS120, putative fucosidase EMBL AAK62842.1
Encoded on	Plasmid pSD15 EMBL AAK62842.1
Organism	Microscilla sp. PRE1 EMBL AAK62842.1
Taxonomic identifier	155537 [NCBI]
Taxonomic lineage	Bacteria › Bacteroidetes › Sphingobacteria › Sphingobacteriales › Flexibacteraceae › Microscilla

Protein attributes

Sequence length	529 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

Ontologies

Keywords
Technical term	Plasmid
Gene Ontology (GO)
Biological process	fucose metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	alpha-L-fucosidase activity Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q93PB1-1 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: D676BA10C79302FD	FASTA	529	61,269
	10 20 30 40 50 60 MKPLMVKKTP LLMSIFLLLI YCSKAQESDV SITISEEQQK QELTYKEEWP SIAKHTTPEW 70 80 90 100 110 120 FRDAKFGIFT CIGPASVATQ HQTTEWYGWA MYDTIGVYWN NAPRGEPGKT REFKLHQKLY 130 140 150 160 170 180 GHQSEFGYKD FIKEFQPTAF DAEEWADLFH KAGAKFMGPI GIFHDNYLNW DSDVSRWNSM 190 200 210 220 230 240 DMAGVDITGD LEKSVRKRDM KFLITFHHAF TWWWYYHSFA FDGSDPAYQD LYTRPHKFSP 250 260 270 280 290 300 DGDSFEEYPD SEFEELWFRK LEEAALKFKP DLYWFDMGLE LLSDDIRKKA FARLLNLAEE 310 320 330 340 350 360 NKQDIGLAYK IKFDVSVPPS AGILDYEKGR STGLRPDPWL SDTPLAGWFY NGRFSRSPKA 370 380 390 400 410 420 IVEILIDIVS KNGCLLLDVS PKPDGTIPED QKETLLGIGE WLDMNGEAIY ETRPWVIAEE 430 440 450 460 470 480 GPTKLDSDGH FNENWEAIYT ENDIRFTRGK DSNTLYLIVM DKPSGRKVTS TTLSTVNPYL 490 500 510 520 NREIEQVTLI GSPDAEIKWK RDLKGLHLSF PTDARGKYAW CYKLNLKPE

References

[1]

"Sequence analysis of a 101-kilobase plasmid required for agar degradation by a Microscilla isolate." Zhong Z., Toukdarian A., Helinski D., Knauf V., Sykes S., Wilkinson J.E., O'Bryne C., Shea T., DeLoughery C., Caspi R. Appl. Environ. Microbiol. 67:5771-5779(2001) [PubMed: 11722934] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: PRE1 EMBL AAK62842.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF339846 Genomic DNA. Translation: AAK62842.1.
RefSeq	NP_116808.1.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	GH29. Glycoside Hydrolase Family 29.
Genome annotation databases
GeneID	3207678.
Family and domain databases
InterPro	IPR000933. Glyco_hydro_29. IPR016286. Glyco_hydro_29_sub. IPR013781. Glyco_hydro_sg_catalytic. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PANTHER	PTHR10030. Glyco_hydro_29. 1 hit.
Pfam	PF01120. Alpha_L_fucos. 1 hit. [Graphical view]
PIRSF	PIRSF001092. Alpha-L-fucosidase. 1 hit.
PRINTS	PR00741. GLHYDRLASE29.
SMART	SM00812. Alpha_L_fucos. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q93PB1_9SPHI

Accession

Primary (citable) accession number: Q93PB1

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	June 16, 2009
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)