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Q93L39 (Q93L39_CLODI) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 21. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
TcdB-C34 Cluster1-2 EMBL CAC41640.1
Gene names
Name:tcdB-C34 EMBL CAC41640.1
OrganismClostridium difficile EMBL CAC41640.1
Taxonomic identifier1496 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length554 AA.
Sequence statusFragment.
Protein existencePredicted

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue5541 EMBL CAC41640.1

Sequences

Sequence LengthMass (Da)Tools
Q93L39 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 9285512AC1B1D87A

FASTA55463,911
        10         20         30         40         50         60 
MSSVNRKQLE KMANVRFRVQ EDEYVAILDA LEEYHNMSEN TVVEKYLKLK DINSLTDTYI 

        70         80         90        100        110        120 
DTYKKSGRNK ALKKFKEYLV TEILELKNSN LTPVEKNLHF IWIGGQINDT AINYINQWKD 

       130        140        150        160        170        180 
VNSDYNVNVF YDSNAFLINT LKKTIIESAS NDTLESFREN LNDPEFNHTA FFRKRMPIIY 

       190        200        210        220        230        240 
DKQQNFINYY KVQKEENPDL IIDDIVKTYL SNEYSKDIDE LNAYIEESLN KVTENSGNDV 

       250        260        270        280        290        300 
RNFEEFKTGE VFNLYEQELV ERWNLAGASD ILRVAILKNI GGVYLDVDML PGIHPDLFKD 

       310        320        330        340        350        360 
INKPDSVKTA VDWEEMQLEA IMKYKEYIPE YTSKHFDTLD EEVQSSFESV LASKSNKSEI 

       370        380        390        400        410        420 
FLPLGDIEVS PLEVKIAFAK GSIINQALIS AKDSYCSDLL IKQIQNRYKT LNDTLGPIIS 

       430        440        450        460        470        480 
QGNDFNTTMN NFGESLGAIA NEENISFIAK IGSYLRVGFY PEANTTITLS GPTIYAGAYK 

       490        500        510        520        530        540 
DLLTFKEMSI DTSILSSELR NFEFPKVNIS QATEQEKNSL WQFNEERAKI QFEEYKKNYF 

       550 
EGALGEDDNL DFSQ

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References

[1]"Variant toxin B and a functional toxin A produced by Clostridium difficile C34."
Mehlig M., Moos M., Braun V., Kalt B., Mahony D.E., von Eichel-Streiber C.
FEMS Microbiol. Lett. 198:171-176(2001) [PubMed: 11430410] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: C34 EMBL CAC41640.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AJ294944 Genomic DNA. Translation: CAC41640.1.

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT44. Glycosyltransferase Family 44.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR024770. TcdA/TcdB_cat.
IPR024772. TcdA/TcdB_N.
[Graphical view]
PfamPF12919. TcdA_TcdB. 1 hit.
PF12918. TcdB_N. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ93L39_CLODI
AccessionPrimary (citable) accession number: Q93L39
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: December 14, 2011
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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