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Protein
Submitted name:

Putative TetR-family transcriptional regulator

Gene

SCO7704

Organism
Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationSAAS annotation

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Putative TetR-family transcriptional regulatorImported
Gene namesi
Ordered Locus Names:SCO7704Imported
OrganismiStreptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)Imported
Taxonomic identifieri100226 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaStreptomycetalesStreptomycetaceaeStreptomycesStreptomyces albidoflavus group
Proteomesi
  • UP000001973 Componenti: Chromosome

PTM / Processingi

Proteomic databases

PRIDEiQ93JG8.

Interactioni

Protein-protein interaction databases

STRINGi100226.SCO7704.

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2G7LX-ray2.10A1-235[»]
ProteinModelPortaliQ93JG8.
SMRiQ93JG8.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiQ93JG8.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini18 – 78HTH tetR-type DNA-bindingInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG4108XSK. Bacteria.
ENOG4111MCW. LUCA.
HOGENOMiHOG000033640.
OMAiQAAWGVD.
OrthoDBiPOG091H02BD.
PhylomeDBiQ93JG8.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
IPR004111. Tet_transcr_reg_TetR_C.
[Graphical view]
PfamiPF02909. TetR_C. 1 hit.
PF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q93JG8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAARRAPISR RDRPAKPALS RRWIVDTAVA LMRAEGLEKV TMRRLAQELD
60 70 80 90 100
TGPASLYVYV ANTAELHAAV LDALLGEVDL TGAGAEEDWR EQLRAVLTSY
110 120 130 140 150
TLVLFAHPQL ARSALVARPS GENYLRLVER VLELLARSGA PGAQVAWGVD
160 170 180 190 200
KLLQDATATA AEQATQEHDP ASHEDWSATV RALRDADEAT HPAIASHMPL
210 220 230
LVAGSAHDRL RWSFDVLVNG ITRTPVPGPA RGAAG
Length:235
Mass (Da):25,341
Last modified:December 1, 2001 - v1
Checksum:iBA4B4CFF7D63F323
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939132 Genomic DNA. Translation: CAC44560.1.
RefSeqiNP_631742.1. NC_003888.3.
WP_011031841.1. NC_003888.3.

Genome annotation databases

EnsemblBacteriaiCAC44560; CAC44560; CAC44560.
GeneIDi1103142.
KEGGisco:SCO7704.
PATRICi23745363. VBIStrCoe124346_7824.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL939132 Genomic DNA. Translation: CAC44560.1.
RefSeqiNP_631742.1. NC_003888.3.
WP_011031841.1. NC_003888.3.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
2G7LX-ray2.10A1-235[»]
ProteinModelPortaliQ93JG8.
SMRiQ93JG8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi100226.SCO7704.

Proteomic databases

PRIDEiQ93JG8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAC44560; CAC44560; CAC44560.
GeneIDi1103142.
KEGGisco:SCO7704.
PATRICi23745363. VBIStrCoe124346_7824.

Phylogenomic databases

eggNOGiENOG4108XSK. Bacteria.
ENOG4111MCW. LUCA.
HOGENOMiHOG000033640.
OMAiQAAWGVD.
OrthoDBiPOG091H02BD.
PhylomeDBiQ93JG8.

Miscellaneous databases

EvolutionaryTraceiQ93JG8.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
1.10.357.10. 1 hit.
InterProiIPR009057. Homeodomain-like.
IPR001647. HTH_TetR.
IPR015893. Tet_transcr_reg_TetR-like_C.
IPR011075. Tet_transcr_reg_TetR-rel_C.
IPR004111. Tet_transcr_reg_TetR_C.
[Graphical view]
PfamiPF02909. TetR_C. 1 hit.
PF00440. TetR_N. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
SSF48498. SSF48498. 1 hit.
PROSITEiPS50977. HTH_TETR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ93JG8_STRCO
AccessioniPrimary (citable) accession number: Q93JG8
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: November 30, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources, Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.