Q93I48 (Q93I48_9BACI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Amylase EMBL BAB71820.1

Gene names

Name:

amyK38 EMBL BAB71820.1

Organism

Bacillus sp. KSM-K38 EMBL BAB71820.1

Taxonomic identifier

129736 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Bacillaceae › Bacillus

Protein attributes

Sequence length	501 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 1UD8 PDB 1UD4 PDB 1UD5 PDB 1UD2 PDB 1UD6 PDB 1UD3
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	calcium ion binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q93I48 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 1240F46739A5CC11	FASTA	501	57,485
	10 20 30 40 50 60 MRRWVVAMLA VLFLFPSVVV ADGLNGTMMQ YYEWHLENDG QHWNRLHDDA AALSDAGITA 70 80 90 100 110 120 IWIPPAYKGN SQADVGYGAY DLYDLGEFNQ KGTVRTKYGT KAQLERAIGS LKSNDINVYG 130 140 150 160 170 180 DVVMNHKMGA DFTEAVQAVQ VNPTNRWQDI SGAYTIDAWT GFDFSGRNNA YSDFKWRWFH 190 200 210 220 230 240 FNGVDWDQRY QENHIFRFAN TNWNWRVDEE NGNYDYLLGS NIDFSHPEVQ DELKDWGSWF 250 260 270 280 290 300 TDELDLDGYR LDAIKHIPFW YTSDWVRHQR NEADQDLFVV GEYWKDDVGA LEFYLDEMNW 310 320 330 340 350 360 EMSLFDVPLN YNFYRASQQG GSYDMRNILR GSLVEAHPMH AVTFVDNHDT QPGESLESWV 370 380 390 400 410 420 ADWFKPLAYA TILTREGGYP NVFYGDYYGI PNDNISAKKD MIDELLDARQ NYAYGTQHDY 430 440 450 460 470 480 FDHWDVVGWT REGSSSRPNS GLATIMSNGP GGSKWMYVGR QNAGQTWTDL TGNNGASVTI 490 500 NGDGWGEFFT NGGSVSVYVN Q

References

[1]	"Deduced amino-acid sequence of a calcium-free alpha-amylase from a strain of Bacillus: implications from molecular modeling of high oxidation stability and chelator resistance of the enzyme." Hagihara H., Hayashi Y., Endo K., Igarashi K., Ozawa T., Kawai S., Ozaki K., Ito S. Eur. J. Biochem. 268:3974-3982(2001) [PubMed: 11453991] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: KSM-K38 EMBL BAB71820.1.
[2]	"Crystal structure of calcium-free alpha-amylase from Bacillus sp. strain KSM-K38 (AmyK38) and its sodium ion binding sites." Nonaka T., Fujihashi M., Kita A., Hagihara H., Ozaki K., Ito S., Miki K. J. Biol. Chem. 278:24818-24824(2003) [PubMed: 12719434] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.13 ANGSTROMS) OF 22-501.
+	Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AB051102 Genomic DNA. Translation: BAB71820.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1UD2	X-ray	2.13	A	22-501	[»]
1UD3	X-ray	2.15	A	22-501	[»]
1UD4	X-ray	2.15	A	22-501	[»]
1UD5	X-ray	2.70	A	22-501	[»]
1UD6	X-ray	2.50	A	22-501	[»]
1UD8	X-ray	2.88	A	22-501	[»]

ProteinModelPortal

Q93I48.

SMR

Q93I48. Positions 22-501.

ModBase

Search...

Protein family/group databases

CAZy

GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR013776. A-amylase_thermo.
IPR015902. Alpha_amylase.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]

Gene3D

G3DSA:2.60.40.1180. Glyco_hydro_13_b. 1 hit.
G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits.

PANTHER

PTHR10357. Alpha_amylase. 1 hit.

Pfam

PF00128. Alpha-amylase. 1 hit.
[Graphical view]

PIRSF

PIRSF001021. Alph-amls_thrmst. 1 hit.

SUPFAM

SSF51445. Glyco_hydro_cat. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q93I48_9BACI

Accession

Primary (citable) accession number: Q93I48

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	May 31, 2011
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)