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Q93DW8 (Q93DW8_CARML) Unreviewed, UniProtKB/TrEMBL

Last modified March 8, 2011. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:agaA EMBL AAL27305.1
OrganismCarnobacterium maltaromaticum (Carnobacterium piscicola) EMBL AAL27305.1
Taxonomic identifier2751 [NCBI]
Taxonomic lineageBacteriaFirmicutesLactobacillalesCarnobacteriaceaeCarnobacterium

Protein attributes

Sequence length728 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functionalpha-galactosidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q93DW8 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: EB3565F0FFBD834A

FASTA72883,887
        10         20         30         40         50         60 
MISITFQEEQ KIFHLATETM SYIFKIEEGN IVAHHYFGRR IVHYHGSRNY PRVDRSFSPN 

        70         80         90        100        110        120 
FYDAKDRFFS KDIVLQEYSD FGTGDFRTPA LVLEQENGSK MTDFRFASYQ IIDGKNVVLG 

       130        140        150        160        170        180 
LPQIHSENSQ TLELLFVDST LPKIQLYLYF SIVEGKDVVI RSAKLVNQSS ESVTIKKMDS 

       190        200        210        220        230        240 
CQLDLPESSF ELISLPGTWA RERQLVREEI HSGIHTIGST RGASSHQQNP FAALVRPETT 

       250        260        270        280        290        300 
ELSGEVFGFS FIYSGSFQFT FEKDPFDQLR INMGFNSLNF NWILGSKQEF QTPESVLAYS 

       310        320        330        340        350        360 
DQGLNGLSQI YHQLYRENLM RGAYQKCERP ILVNNWEATY FDFDEAKIKT LIEESSALGI 

       370        380        390        400        410        420 
ELFVLDDGWF GKRNSDKTSL GDWEINLEKL PNGLNGMNET AKECQMKFGL WFEPEMISEE 

       430        440        450        460        470        480 
SELYKEHPDW VLRVPNRPMS RSRDQFVLDF SRADVRIYIY QKMAEILSTH SISYVKWDFN 

       490        500        510        520        530        540 
RHLSEVYSDA LPAKQQGEVH HRYLLGLYEF LEKLTTSFPT VLFESCSGGG GRFDPGMLYY 

       550        560        570        580        590        600 
MPQTWTSDNT DAVARLKIQY STSLVYPVIT MGSHVSAIPN HQTGRETSLE MRGAVAMSGV 

       610        620        630        640        650        660 
FGYELDVNSL TKEEKKEIKE QVTFYKEHRQ LIQFGLFYRL LSPFEGNQTA WCFVSKDQKE 

       670        680        690        700        710        720 
CLVFYFNVLE EASAPLTLLK LAGLQDNELY HSDELGTFSG SELMHAGFYT STKKIGDFRS 


ECYYFKTE 

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References

[1]"Characterization of two new glycosyl hydrolases from the lactic acid bacterium Carnobacterium piscicola strain BA."
Coombs J., Brenchley J.E.
Appl. Environ. Microbiol. 67:5094-5099(2001) [PubMed: 11679331] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BA EMBL AAL27305.1.
[2]Coombs J.M., Brenchley J.E.
Submitted (MAY-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: BA EMBL AAL27305.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF376480 Genomic DNA. Translation: AAL27305.1.

3D structure databases

ProteinModelPortalQ93DW8.
ModBaseSearch...

Protein family/group databases

CAZyGH36. Glycoside Hydrolase Family 36.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

InterProIPR013785. Aldolase_TIM.
IPR002252. Glyco_hydro_36.
IPR000111. Glyco_hydro_GHD.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
PfamPF02065. Melibiase. 1 hit.
[Graphical view]
PIRSFPIRSF005536. Agal. 1 hit.
PRINTSPR00743. GLHYDRLASE36.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00512. ALPHA_GALACTOSIDASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ93DW8_CARML
AccessionPrimary (citable) accession number: Q93DW8
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: March 8, 2011
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)