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Q93CG9 (Q93CG9_PHOPR) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
OrganismPhotobacterium profundum (Photobacterium sp. (strain SS9)) EMBL AAL01059.1
Taxonomic identifier74109 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaePhotobacterium

Protein attributes

Sequence length133 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 3R87 PDB 4I45
Gene Ontology (GO)
   Molecular_functionhydrolase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q93CG9 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 1F6B333217E1A5E4

FASTA13315,398
        10         20         30         40         50         60 
MSKIYHHPVQ IYYEDTDHSG VVYHPNFLKY FERAREHVID SDKLATLWND HGLGFAVYKA 

        70         80         90        100        110        120 
NMIFQDGVEF AEICDIRTSF TLDGKYKTLW RQEVWRPGAS RAAVIGDIEM VCLDKEKRLQ 

       130 
PVPADILASM MAD 

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References

[1]"Structure and regulation of the omega-3 polyunsaturated fatty acid synthase genes from the deep-sea bacterium Photobacterium profundum strain SS9."
Allen E.E., Bartlett D.H.
Microbiology 148:1903-1913(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SS9 EMBL AAL01059.1.
[2]"Structure, activity, and substrate selectivity of the Orf6 thioesterase from Photobacterium profundum."
Rodriguez-Guilbe M., Oyola-Robles D., Schreiter E.R., Baerga-Ortiz A.
J. Biol. Chem. 288:10841-10848(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.05 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF409100 Genomic DNA. Translation: AAL01059.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
3R87X-ray1.05A1-133[»]
4I45X-ray1.40A1-133[»]
ProteinModelPortalQ93CG9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Family and domain databases

Gene3D3.10.129.10. 1 hit.
InterProIPR008272. HB-CoA_thioesterase_AS.
IPR029069. HotDog_dom.
IPR006683. Thioestr_supf.
IPR006684. YbgC/YbaW.
[Graphical view]
PfamPF03061. 4HBT. 1 hit.
[Graphical view]
PIRSFPIRSF003230. YbgC. 1 hit.
SUPFAMSSF54637. SSF54637. 1 hit.
PROSITEPS01328. 4HBCOA_THIOESTERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ93CG9_PHOPR
AccessionPrimary (citable) accession number: Q93CG9
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: June 11, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)