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Protein
Submitted name:

Superantigen YPMc

Gene
N/A
Organism
Yersinia pseudotuberculosis
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Superantigen YPMcImported
OrganismiYersinia pseudotuberculosisImported
Taxonomic identifieri633 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeYersinia

Structurei

3D structure databases

ProteinModelPortaliQ93C63.
SMRiQ93C63. Positions 34-151.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di2.60.120.510. 1 hit.
InterProiIPR015227. Mitogen_YERPS.
[Graphical view]
PfamiPF09144. YpM. 1 hit.
[Graphical view]
SUPFAMiSSF101606. SSF101606. 1 hit.

Sequencei

Sequence statusi: Complete.

Q93C63-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNKLLSLLT FTLFSGVALA TDYDNTLNSI PSLRIPNIAT YTGTIQGKGE
60 70 80 90 100
VCIIGNKEGK TRGGELYAVL YSTNVNADMT LILLRNVGGN GWGEIKRNDI
110 120 130 140 150
DKPLKYEDYY TSGLSWIWKI KNNSSETSNY SLDATVHDDK EDSDVLTKCP

V
Length:151
Mass (Da):16,705
Last modified:December 1, 2001 - v1
Checksum:i546B2E4D5F20B65E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF414083 Genomic DNA. Translation: AAL02230.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF414083 Genomic DNA. Translation: AAL02230.1.

3D structure databases

ProteinModelPortaliQ93C63.
SMRiQ93C63. Positions 34-151.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.120.510. 1 hit.
InterProiIPR015227. Mitogen_YERPS.
[Graphical view]
PfamiPF09144. YpM. 1 hit.
[Graphical view]
SUPFAMiSSF101606. SSF101606. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The superantigen gene ypm is located in an unstable chromosomal locus of Yersinia pseudotuberculosis."
    Carnoy C., Floquet S., Marceau M., Sebbane F., Haentjens-Herwegh S., Devalckenaere A., Simonet M.
    J. Bacteriol. 184:4489-4499(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: YPT1Imported.

Entry informationi

Entry nameiQ93C63_YERPU
AccessioniPrimary (citable) accession number: Q93C63
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: October 1, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.