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Protein
Submitted name:

IpgD

Gene

ipgD

Organism
Escherichia coli
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
IpgDImported
Gene namesi
Name:ipgDImported
OrganismiEscherichia coliImported
Taxonomic identifieri562 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Family & Domainsi

Family and domain databases

InterProiIPR008108. IpgD/SopB.
[Graphical view]
PfamiPF05925. IpgD. 1 hit.
[Graphical view]
PRINTSiPR01734. TYPE3OMBPROT.

Sequencei

Sequence statusi: Complete.

Q939M7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MHITNLGLHQ VSFQSGDSYK GAEETGKHKG VSVISYQRVK NGERNKGIEA
60 70 80 90 100
LNRLYLQNQT SLTGKSLLFA RDKAEVFCEA IKLAGGDTSK IKAMMERLDT
110 120 130 140 150
YKLGEVNKRH INELNKVISE EIRAQLGIKN KKELQTKIKQ IFTDYLNNKN
160 170 180 190 200
WEPVNKNISH HGKNYSFQLT PASHMKIGNK NIFVKEYNGK GICCASTRER
210 220 230 240 250
DHIANMWLSK VVDDEGKEIF SGIRHGVISA YGLKKNSSER AVAARNKAEE
260 270 280 290 300
LVSAALYSRP ELLSQALSGK TVDLKIVSTS LLTPTSLTGG EESMLKDQVS
310 320 330 340 350
ALKGLNSKRG GPTKLLIRNS DGLLKEVSVN LKVVTFNFGV NELALKMGLG
360 370 380 390 400
WRNVDKLNDE SICSLLGDNF LKNGVIGGWA AEAIEKNPPC KNDVIYLANQ
410 420 430 440 450
IKEIVNNKLQ KNDNGEPYKL SQRVTLLAYT IGAVPCWNCK SGKDRTGMQD
460 470 480 490 500
AEIKREIIRK HETGQFSQLN SKLSSEEKRL FSTILMNSGN MEIQEMNTGV
510 520 530
PGNKVMKKLP LSSLELSYSE RIGDPKIWNM VKGYSSFV
Length:538
Mass (Da):59,905
Last modified:December 1, 2001 - v1
Checksum:iB3DBE5FF5F8ECF40
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY029084 Genomic DNA. Translation: AAK53908.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY029084 Genomic DNA. Translation: AAK53908.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiIPR008108. IpgD/SopB.
[Graphical view]
PfamiPF05925. IpgD. 1 hit.
[Graphical view]
PRINTSiPR01734. TYPE3OMBPROT.
ProtoNetiSearch...

Publicationsi

  1. "Molecular evolution of large virulence plasmid in Shigella clones and enteroinvasive Escherichia coli."
    Lan R., Lumb B., Ryan D., Reeves P.R.
    Infect. Immun. 69:6303-6309(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ939M7_ECOLX
AccessioniPrimary (citable) accession number: Q939M7
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: October 1, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.