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Protein
Submitted name:

SCP-Like extracellular protein

Gene

scl-9

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Submitted name:
SCP-Like extracellular proteinImported
Gene namesi
Name:scl-9Imported
ORF Names:CELE_F49E11.4Imported, F49E11.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiF49E11.4; CE10800; WBGene00009890; scl-9.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717Sequence analysisAdd
BLAST
Chaini18 – 213196Sequence analysisPRO_5004321587Add
BLAST

Proteomic databases

PaxDbiQ93747.

Interactioni

Protein-protein interaction databases

STRINGi6239.F49E11.4.

Structurei

3D structure databases

ProteinModelPortaliQ93747.
SMRiQ93747. Positions 28-184.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini23 – 180158SCPInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the CRISP family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3017. Eukaryota.
COG2340. LUCA.
GeneTreeiENSGT00760000119004.
HOGENOMiHOG000036879.
InParanoidiQ93747.
OMAiYAEASSM.
OrthoDBiEOG7F7WB4.
PhylomeDBiQ93747.

Family and domain databases

Gene3Di3.40.33.10. 1 hit.
InterProiIPR001283. Allrgn_V5/Tpx1.
IPR014044. CAP_domain.
IPR002413. V5_allergen.
[Graphical view]
PANTHERiPTHR10334. PTHR10334. 1 hit.
PfamiPF00188. CAP. 1 hit.
[Graphical view]
PRINTSiPR00838. V5ALLERGEN.
PR00837. V5TPXLIKE.
SMARTiSM00198. SCP. 1 hit.
[Graphical view]
SUPFAMiSSF55797. SSF55797. 1 hit.

Sequencei

Sequence statusi: Complete.

Q93747-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTVLLLLFA SAIGVWSDNF SKEGQLNLLN VHNEFRSQLA LGQLSFRGVK
60 70 80 90 100
KPSASMMRKI SWSKKLTNAA TKFAETCPKN HSVVMNTGES IFWHFSSSLS
110 120 130 140 150
TPEQYATLAP QKWWNEFETN GWDSLIYNHA SQRFQIGHAV QMAWHTTSKV
160 170 180 190 200
GCGYSKCAVG TPEQTMVVVC RYFQKGNIEG EPIYNEGETC TKCPEEYQKC
210
PSGLCEKEGV ETD
Length:213
Mass (Da):23,979
Last modified:February 1, 1997 - v1
Checksum:iADD56E2B33A9DD8A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA94351.1.
PIRiT22439.
RefSeqiNP_502497.1. NM_070096.1.
UniGeneiCel.12900.

Genome annotation databases

EnsemblMetazoaiF49E11.4; F49E11.4; WBGene00009890.
GeneIDi186048.
KEGGicel:CELE_F49E11.4.
UCSCiF49E11.4. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA94351.1.
PIRiT22439.
RefSeqiNP_502497.1. NM_070096.1.
UniGeneiCel.12900.

3D structure databases

ProteinModelPortaliQ93747.
SMRiQ93747. Positions 28-184.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F49E11.4.

Proteomic databases

PaxDbiQ93747.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF49E11.4; F49E11.4; WBGene00009890.
GeneIDi186048.
KEGGicel:CELE_F49E11.4.
UCSCiF49E11.4. c. elegans.

Organism-specific databases

CTDi186048.
WormBaseiF49E11.4; CE10800; WBGene00009890; scl-9.

Phylogenomic databases

eggNOGiKOG3017. Eukaryota.
COG2340. LUCA.
GeneTreeiENSGT00760000119004.
HOGENOMiHOG000036879.
InParanoidiQ93747.
OMAiYAEASSM.
OrthoDBiEOG7F7WB4.
PhylomeDBiQ93747.

Family and domain databases

Gene3Di3.40.33.10. 1 hit.
InterProiIPR001283. Allrgn_V5/Tpx1.
IPR014044. CAP_domain.
IPR002413. V5_allergen.
[Graphical view]
PANTHERiPTHR10334. PTHR10334. 1 hit.
PfamiPF00188. CAP. 1 hit.
[Graphical view]
PRINTSiPR00838. V5ALLERGEN.
PR00837. V5TPXLIKE.
SMARTiSM00198. SCP. 1 hit.
[Graphical view]
SUPFAMiSSF55797. SSF55797. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiQ93747_CAEEL
AccessioniPrimary (citable) accession number: Q93747
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: June 8, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.