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Protein
Submitted name:

SCP-Like extracellular protein

Gene

scl-9

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

ReactomeiR-CEL-6798695. Neutrophil degranulation.

Names & Taxonomyi

Protein namesi
Submitted name:
SCP-Like extracellular proteinImported
Gene namesi
Name:scl-9Imported
ORF Names:CELE_F49E11.4Imported, F49E11.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiF49E11.4; CE10800; WBGene00009890; scl-9.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_500432158718 – 213Sequence analysisAdd BLAST196

Proteomic databases

PaxDbiQ93747.

Expressioni

Gene expression databases

BgeeiWBGene00009890.

Interactioni

Protein-protein interaction databases

STRINGi6239.F49E11.4.

Structurei

3D structure databases

ProteinModelPortaliQ93747.
SMRiQ93747.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini23 – 180SCPInterPro annotationAdd BLAST158

Sequence similaritiesi

Belongs to the CRISP family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3017. Eukaryota.
COG2340. LUCA.
GeneTreeiENSGT00760000119004.
HOGENOMiHOG000036879.
InParanoidiQ93747.
OMAiYAEASSM.
OrthoDBiEOG091G0GZP.
PhylomeDBiQ93747.

Family and domain databases

Gene3Di3.40.33.10. 1 hit.
InterProiView protein in InterPro
IPR001283. Allrgn_V5/Tpx1.
IPR014044. CAP_domain.
IPR002413. V5_allergen.
PANTHERiPTHR10334. PTHR10334. 1 hit.
PfamiView protein in Pfam
PF00188. CAP. 1 hit.
PRINTSiPR00838. V5ALLERGEN.
PR00837. V5TPXLIKE.
SMARTiView protein in SMART
SM00198. SCP. 1 hit.
SUPFAMiSSF55797. SSF55797. 1 hit.

Sequencei

Sequence statusi: Complete.

Q93747-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTVLLLLFA SAIGVWSDNF SKEGQLNLLN VHNEFRSQLA LGQLSFRGVK
60 70 80 90 100
KPSASMMRKI SWSKKLTNAA TKFAETCPKN HSVVMNTGES IFWHFSSSLS
110 120 130 140 150
TPEQYATLAP QKWWNEFETN GWDSLIYNHA SQRFQIGHAV QMAWHTTSKV
160 170 180 190 200
GCGYSKCAVG TPEQTMVVVC RYFQKGNIEG EPIYNEGETC TKCPEEYQKC
210
PSGLCEKEGV ETD
Length:213
Mass (Da):23,979
Last modified:February 1, 1997 - v1
Checksum:iADD56E2B33A9DD8A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAA94351.1.
PIRiT22439.
RefSeqiNP_502497.1. NM_070096.1.
UniGeneiCel.12900.

Genome annotation databases

EnsemblMetazoaiF49E11.4; F49E11.4; WBGene00009890.
GeneIDi186048.
KEGGicel:CELE_F49E11.4.
UCSCiF49E11.4. c. elegans.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiQ93747_CAEEL
AccessioniPrimary (citable) accession number: Q93747
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: June 7, 2017
This is version 110 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported