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Protein
Submitted name:

SCP-Like extracellular protein

Gene

scl-9

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Submitted name:
SCP-Like extracellular proteinImported
Gene namesi
Name:scl-9Imported
ORF Names:CELE_F49E11.4Imported, F49E11.4Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiF49E11.4 ; CE10800 ; WBGene00009890 ; scl-9

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 17Sequence analysisAdd BLAST17
ChainiPRO_500432158718 – 213Sequence analysisAdd BLAST196

Proteomic databases

PaxDbiQ93747

Expressioni

Gene expression databases

BgeeiWBGene00009890

Interactioni

Protein-protein interaction databases

STRINGi6239.F49E11.4

Structurei

3D structure databases

ProteinModelPortaliQ93747
SMRiQ93747
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini23 – 180SCPInterPro annotationAdd BLAST158

Sequence similaritiesi

Belongs to the CRISP family.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3017 Eukaryota
COG2340 LUCA
GeneTreeiENSGT00900000141278
HOGENOMiHOG000036879
InParanoidiQ93747
OMAiYAEASSM
OrthoDBiEOG091G0GZP
PhylomeDBiQ93747

Family and domain databases

Gene3Di3.40.33.10, 1 hit
InterProiView protein in InterPro
IPR001283 Allrgn_V5/Tpx1
IPR014044 CAP_domain
IPR035940 CAP_sf
IPR002413 V5_allergen
PANTHERiPTHR10334 PTHR10334, 1 hit
PfamiView protein in Pfam
PF00188 CAP, 1 hit
PRINTSiPR00838 V5ALLERGEN
PR00837 V5TPXLIKE
SMARTiView protein in SMART
SM00198 SCP, 1 hit
SUPFAMiSSF55797 SSF55797, 1 hit

Sequencei

Sequence statusi: Complete.

Q93747-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRTVLLLLFA SAIGVWSDNF SKEGQLNLLN VHNEFRSQLA LGQLSFRGVK
60 70 80 90 100
KPSASMMRKI SWSKKLTNAA TKFAETCPKN HSVVMNTGES IFWHFSSSLS
110 120 130 140 150
TPEQYATLAP QKWWNEFETN GWDSLIYNHA SQRFQIGHAV QMAWHTTSKV
160 170 180 190 200
GCGYSKCAVG TPEQTMVVVC RYFQKGNIEG EPIYNEGETC TKCPEEYQKC
210
PSGLCEKEGV ETD
Length:213
Mass (Da):23,979
Last modified:February 1, 1997 - v1
Checksum:iADD56E2B33A9DD8A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA Translation: CAA94351.1
PIRiT22439
RefSeqiNP_502497.1, NM_070096.1
UniGeneiCel.12900

Genome annotation databases

EnsemblMetazoaiF49E11.4; F49E11.4; WBGene00009890
GeneIDi186048
KEGGicel:CELE_F49E11.4
UCSCiF49E11.4 c. elegans

Similar proteinsi

Entry informationi

Entry nameiQ93747_CAEEL
AccessioniPrimary (citable) accession number: Q93747
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: February 28, 2018
This is version 113 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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