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Protein
Submitted name:

SLC (SoLute Carrier) homolog

Gene

slc-25a42

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
SLC (SoLute Carrier) homologImported
Gene namesi
Name:slc-25a42Imported
Synonyms:slc-25A42Imported
ORF Names:CELE_F43G9.3Imported, F43G9.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiF43G9.3; CE10358; WBGene00009666; slc-25A42.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ93717.
PeptideAtlasiQ93717.

Expressioni

Gene expression databases

BgeeiWBGene00009666.

Interactioni

Protein-protein interaction databases

STRINGi6239.F43G9.3.

Structurei

3D structure databases

ProteinModelPortaliQ93717.
SMRiQ93717.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the mitochondrial carrier (TC 2.A.29) family. [View classification]UniRule annotationSAAS annotation

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiKOG0752. Eukaryota.
ENOG410ZRF1. LUCA.
GeneTreeiENSGT00760000119245.
HOGENOMiHOG000165726.
InParanoidiQ93717.
KOiK15085.
OMAiFGAHEEI.
OrthoDBiEOG091G0C8S.
PhylomeDBiQ93717.

Family and domain databases

Gene3Di1.50.40.10. 1 hit.
InterProiIPR002067. Mit_carrier.
IPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom.
[Graphical view]
PfamiPF00153. Mito_carr. 3 hits.
[Graphical view]
PRINTSiPR00926. MITOCARRIER.
SUPFAMiSSF103506. SSF103506. 1 hit.
PROSITEiPS50920. SOLCAR. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q93717-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPHDSNEGKQ RPSVVLSLSA GAIAGALAKT TIAPLDRTKI YFQVSSTRGY
60 70 80 90 100
SFRSAIKFIK LTYRENGFFA LYRGNSATMA RVVPYASMQF AAFEQYKKLL
110 120 130 140 150
KVDENGSRTP VKRYITGSLA ATTATMITYP LDTAKARLSV SSKLQYSSLK
160 170 180 190 200
HVFVKTYKEG GIQLLYRGIY PTILGVIPYA GSSFFTYETL KIMYRDHRGE
210 220 230 240 250
VENSYYRMLF GMLAGLIGQS SSYPLDIVRR RMQTGRIPSG WSPLRALIHI
260 270 280 290
YHTEGLKRGL YKGLSMNWLK GPIAVGVSFT TYEKVLELVG HLKR
Length:294
Mass (Da):32,997
Last modified:February 1, 1997 - v1
Checksum:i9588FABB17FB955C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CAB02107.1.
PIRiT22145.
RefSeqiNP_492333.1. NM_059932.4.
UniGeneiCel.18726.

Genome annotation databases

EnsemblMetazoaiF43G9.3; F43G9.3; WBGene00009666.
GeneIDi172656.
KEGGicel:CELE_F43G9.3.
UCSCiF43G9.3. c. elegans.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA. Translation: CAB02107.1.
PIRiT22145.
RefSeqiNP_492333.1. NM_059932.4.
UniGeneiCel.18726.

3D structure databases

ProteinModelPortaliQ93717.
SMRiQ93717.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6239.F43G9.3.

Proteomic databases

PaxDbiQ93717.
PeptideAtlasiQ93717.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiF43G9.3; F43G9.3; WBGene00009666.
GeneIDi172656.
KEGGicel:CELE_F43G9.3.
UCSCiF43G9.3. c. elegans.

Organism-specific databases

CTDi172656.
WormBaseiF43G9.3; CE10358; WBGene00009666; slc-25A42.

Phylogenomic databases

eggNOGiKOG0752. Eukaryota.
ENOG410ZRF1. LUCA.
GeneTreeiENSGT00760000119245.
HOGENOMiHOG000165726.
InParanoidiQ93717.
KOiK15085.
OMAiFGAHEEI.
OrthoDBiEOG091G0C8S.
PhylomeDBiQ93717.

Gene expression databases

BgeeiWBGene00009666.

Family and domain databases

Gene3Di1.50.40.10. 1 hit.
InterProiIPR002067. Mit_carrier.
IPR018108. Mitochondrial_sb/sol_carrier.
IPR023395. Mt_carrier_dom.
[Graphical view]
PfamiPF00153. Mito_carr. 3 hits.
[Graphical view]
PRINTSiPR00926. MITOCARRIER.
SUPFAMiSSF103506. SSF103506. 1 hit.
PROSITEiPS50920. SOLCAR. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ93717_CAEEL
AccessioniPrimary (citable) accession number: Q93717
Entry historyi
Integrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: November 30, 2016
This is version 121 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.