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Protein
Submitted name:

SLC (SoLute Carrier) homolog

Gene

slc-25a42

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
SLC (SoLute Carrier) homologImported
Gene namesi
Name:slc-25a42Imported
Synonyms:slc-25A42Imported
ORF Names:CELE_F43G9.3Imported, F43G9.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiF43G9.3 ; CE10358 ; WBGene00009666 ; slc-25A42

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Membrane

PTM / Processingi

Proteomic databases

PaxDbiQ93717
PeptideAtlasiQ93717

Expressioni

Gene expression databases

BgeeiWBGene00009666

Interactioni

Protein-protein interaction databases

STRINGi6239.F43G9.3

Structurei

3D structure databases

ProteinModelPortaliQ93717
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati12 – 99SolcarPROSITE-ProRule annotationAdd BLAST88
Repeati108 – 193SolcarPROSITE-ProRule annotationAdd BLAST86
Repeati202 – 288SolcarPROSITE-ProRule annotationAdd BLAST87

Sequence similaritiesi

Belongs to the mitochondrial carrier (TC 2.A.29) family. [View classification]UniRule annotationSAAS annotation

Keywords - Domaini

RepeatSAAS annotation, Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiKOG0752 Eukaryota
ENOG410ZRF1 LUCA
GeneTreeiENSGT00880000137904
HOGENOMiHOG000165726
InParanoidiQ93717
KOiK15085
OMAiTHDTVGD
OrthoDBiEOG091G0C8S
PhylomeDBiQ93717

Family and domain databases

Gene3Di1.50.40.10, 1 hit
InterProiView protein in InterPro
IPR002067 Mit_carrier
IPR018108 Mitochondrial_sb/sol_carrier
IPR023395 Mt_carrier_dom_sf
PfamiView protein in Pfam
PF00153 Mito_carr, 3 hits
PRINTSiPR00926 MITOCARRIER
SUPFAMiSSF103506 SSF103506, 1 hit
PROSITEiView protein in PROSITE
PS50920 SOLCAR, 3 hits

Sequencei

Sequence statusi: Complete.

Q93717-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPHDSNEGKQ RPSVVLSLSA GAIAGALAKT TIAPLDRTKI YFQVSSTRGY
60 70 80 90 100
SFRSAIKFIK LTYRENGFFA LYRGNSATMA RVVPYASMQF AAFEQYKKLL
110 120 130 140 150
KVDENGSRTP VKRYITGSLA ATTATMITYP LDTAKARLSV SSKLQYSSLK
160 170 180 190 200
HVFVKTYKEG GIQLLYRGIY PTILGVIPYA GSSFFTYETL KIMYRDHRGE
210 220 230 240 250
VENSYYRMLF GMLAGLIGQS SSYPLDIVRR RMQTGRIPSG WSPLRALIHI
260 270 280 290
YHTEGLKRGL YKGLSMNWLK GPIAVGVSFT TYEKVLELVG HLKR
Length:294
Mass (Da):32,997
Last modified:February 1, 1997 - v1
Checksum:i9588FABB17FB955C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CAB02107.1
PIRiT22145
RefSeqiNP_492333.1, NM_059932.4
UniGeneiCel.18726

Genome annotation databases

EnsemblMetazoaiF43G9.3; F43G9.3; WBGene00009666
GeneIDi172656
KEGGicel:CELE_F43G9.3
UCSCiF43G9.3 c. elegans

Similar proteinsi

Entry informationi

Entry nameiQ93717_CAEEL
AccessioniPrimary (citable) accession number: Q93717
Entry historyiIntegrated into UniProtKB/TrEMBL: February 1, 1997
Last sequence update: February 1, 1997
Last modified: April 25, 2018
This is version 132 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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