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Q935Y7

- GLGA_SYNE7

UniProt

Q935Y7 - GLGA_SYNE7

Protein

Glycogen synthase

Gene

glgA

Organism
Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 65 (01 Oct 2014)
      Sequence version 3 (18 Apr 2006)
      Previous versions | rss
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    Functioni

    Synthesizes alpha-1,4-glucan chains using ADP-glucose.UniRule annotation

    Catalytic activityi

    ADP-glucose + (1,4-alpha-D-glucosyl)(n) = ADP + (1,4-alpha-D-glucosyl)(n+1).UniRule annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei15 – 151ADP-glucoseUniRule annotation

    GO - Molecular functioni

    1. starch synthase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    BioCyciSYNEL:SYNPCC7942_2518-MONOMER.
    UniPathwayiUPA00164.

    Protein family/group databases

    CAZyiGT5. Glycosyltransferase Family 5.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycogen synthaseUniRule annotation (EC:2.4.1.21UniRule annotation)
    Alternative name(s):
    Starch [bacterial glycogen] synthaseUniRule annotation
    Gene namesi
    Name:glgAUniRule annotation
    Ordered Locus Names:Synpcc7942_2518
    ORF Names:sea0009
    OrganismiSynechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2)
    Taxonomic identifieri1140 [NCBI]
    Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesSynechococcus
    ProteomesiUP000002717: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 465465Glycogen synthasePRO_0000188653Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi1140.Synpcc7942_2518.

    Structurei

    3D structure databases

    ProteinModelPortaliQ935Y7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0297.
    HOGENOMiHOG000294940.
    KOiK00703.
    OrthoDBiEOG6JTC6Z.

    Family and domain databases

    HAMAPiMF_00484. Glycogen_synth.
    InterProiIPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view]
    PfamiPF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02095. glgA. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q935Y7-1 [UniParc]FASTAAdd to Basket

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    MRILFVAAEC APFAKVGGMG DVVGSLPKVL KALGHDVRIF MPYYGFLNSK    50
    LDIPAEPIWW GYAMFNHFAV YETQLPGSDV PLYLMGHPAF DPHRIYSGED 100
    EDWRFTFFAN GAAEFSWNYW KPQVIHCHDW HTGMIPVWMH QSPDISTVFT 150
    IHNLAYQGPW RWKLEKITWC PWYMQGDSTM AAALLYADRV NTVSPTYAQQ 200
    IQTPTYGEKL EGLLSFISGK LSGILNGIDV DSYNPATDTR IVANYDRDTL 250
    DKRLNNKLAL QKEMGLEVNP DRFLIGFVAR LVEQKGIDLL LQILDRFLSY 300
    SDAQFVVLGT GERYYETQLW ELATRYPGRM STYLMYDEGL SRRIYAGSDA 350
    FLVPSRFEPC GITQMLALRY GSVPIVRRTG GLVDTVFHHD PRHAEGNGYC 400
    FDRYEPLDLY TCLVRAWESY QYQPQWQKLQ QRGMAVDLSW KQSAIAYEQL 450
    YAEAIGLPID VLQEA 465
    Length:465
    Mass (Da):53,347
    Last modified:April 18, 2006 - v3
    Checksum:iF49F080B462B922B
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Sequence conflicti33 – 342LG → SA in AAL03921. 1 PublicationCurated
    Sequence conflicti38 – 381R → G in AAL03921. 1 PublicationCurated
    Sequence conflicti42 – 421P → R in AAL03921. 1 PublicationCurated
    Sequence conflicti48 – 481N → T in AAL03921. 1 PublicationCurated
    Sequence conflicti251 – 2522DK → IA in AAL03921. 1 PublicationCurated
    Sequence conflicti257 – 2571K → R in AAL03921. 1 PublicationCurated

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U30252 Genomic DNA. Translation: AAL03921.2.
    CP000100 Genomic DNA. Translation: ABB58548.1.
    RefSeqiYP_401535.1. NC_007604.1.

    Genome annotation databases

    EnsemblBacteriaiABB58548; ABB58548; Synpcc7942_2518.
    GeneIDi3774538.
    KEGGisyf:Synpcc7942_2518.
    PATRICi23790611. VBISynElo51371_2816.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U30252 Genomic DNA. Translation: AAL03921.2 .
    CP000100 Genomic DNA. Translation: ABB58548.1 .
    RefSeqi YP_401535.1. NC_007604.1.

    3D structure databases

    ProteinModelPortali Q935Y7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 1140.Synpcc7942_2518.

    Protein family/group databases

    CAZyi GT5. Glycosyltransferase Family 5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABB58548 ; ABB58548 ; Synpcc7942_2518 .
    GeneIDi 3774538.
    KEGGi syf:Synpcc7942_2518.
    PATRICi 23790611. VBISynElo51371_2816.

    Phylogenomic databases

    eggNOGi COG0297.
    HOGENOMi HOG000294940.
    KOi K00703.
    OrthoDBi EOG6JTC6Z.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .
    BioCyci SYNEL:SYNPCC7942_2518-MONOMER.

    Family and domain databases

    HAMAPi MF_00484. Glycogen_synth.
    InterProi IPR001296. Glyco_trans_1.
    IPR011835. Glycogen/starch_synth.
    IPR013534. Starch_synth_cat_dom.
    [Graphical view ]
    Pfami PF08323. Glyco_transf_5. 1 hit.
    PF00534. Glycos_transf_1. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02095. glgA. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Synechococcus elongatus PCC7942 genome sequence, cosmid 7H1."
      Holtman C.K., Socias T., Mohler B.J., Chen Y., Min H., Golden S.S., Youderian P.
      Submitted (NOV-2002) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    2. "Complete sequence of chromosome 1 of Synechococcus elongatus PCC 7942."
      US DOE Joint Genome Institute
      Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina T., Hammon N., Israni S., Pitluck S., Schmutz J., Larimer F., Land M., Kyrpides N., Lykidis A., Richardson P.
      Submitted (AUG-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: PCC 7942.

    Entry informationi

    Entry nameiGLGA_SYNE7
    AccessioniPrimary (citable) accession number: Q935Y7
    Secondary accession number(s): Q31K71
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 5, 2002
    Last sequence update: April 18, 2006
    Last modified: October 1, 2014
    This is version 65 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3