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Protein

60S acidic ribosomal protein P0

Gene

rla-0

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Ribosomal protein P0 is the functional equivalent of E.coli protein L10.

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
60S acidic ribosomal protein P0
Gene namesi
Name:rla-0Imported
Synonyms:rpa-0Imported
ORF Names:F25H2.10Imported
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiF25H2.10 ; CE09655 ; WBGene00004408 ; rla-0

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001547662 – 31260S acidic ribosomal protein P0Add BLAST311

Post-translational modificationi

Phosphorylated.By similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiQ93572
PaxDbiQ93572
PeptideAtlasiQ93572
PRIDEiQ93572

2D gel databases

World-2DPAGEi0011:Q93572
0020:Q93572

Expressioni

Gene expression databases

BgeeiWBGene00004408

Interactioni

Subunit structurei

P0 forms a pentameric complex by interaction with dimers of P1 and P2.

Protein-protein interaction databases

BioGridi38357, 7 interactors
DIPiDIP-26018N
IntActiQ93572, 9 interactors
STRINGi6239.F25H2.10.2

Structurei

3D structure databases

ProteinModelPortaliQ93572
SMRiQ93572
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0815 Eukaryota
COG0244 LUCA
GeneTreeiENSGT00390000017839
HOGENOMiHOG000210987
InParanoidiQ93572
KOiK02941
OMAiMAHVAEW
OrthoDBiEOG091G0F47
PhylomeDBiQ93572

Family and domain databases

InterProiView protein in InterPro
IPR030670 L10E_eukaryotes
IPR001790 Ribosomal_L10P
PfamiView protein in Pfam
PF00466 Ribosomal_L10, 1 hit
PIRSFiPIRSF039087 L10E, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q93572-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVREDRSTWK ANYFTKLVEL FEEYPKCLLV GVDNVGSKQM QEIRQAMRGH
60 70 80 90 100
AEILMGKNTM IRKALRGHLG KNPSLEKLLP HIVENVGFVF TKEDLGEIRS
110 120 130 140 150
KLLENRKGAP AKAGAIAPCD VKLPPQNTGM GPEKTSFFQA LQIPTKIARG
160 170 180 190 200
TIEILNDVHL IKEGDKVGAS ESALLNMLGV TPFSYGLVVR QVYDDGTLYT
210 220 230 240 250
PEVLDMTTEE LRKRFLSGVR NVASVSLAVN YPTLASVAHS LANGLQNMLG
260 270 280 290 300
VAAVTDVSFK EAETIKAFIA DPSKFAAAAP AAAAAPAAAA PAAKKEEPKE
310
ESDDDMGFGL FD
Length:312
Mass (Da):33,774
Last modified:January 23, 2007 - v3
Checksum:i0D90B15C30BDCB30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z79754 Genomic DNA Translation: CAB02098.1
PIRiT21351
RefSeqiNP_492766.1, NM_060365.7
UniGeneiCel.20069

Genome annotation databases

EnsemblMetazoaiF25H2.10; F25H2.10; WBGene00004408
GeneIDi172943
KEGGicel:CELE_F25H2.10
UCSCiF25H2.10.1 c. elegans

Similar proteinsi

Entry informationi

Entry nameiRLA0_CAEEL
AccessioniPrimary (citable) accession number: Q93572
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: January 23, 2007
Last modified: March 28, 2018
This is version 124 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome
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Main funding by: National Institutes of Health