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Protein

60S acidic ribosomal protein P0

Gene

rpa-0

Organism
Caenorhabditis elegans
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

Ribosomal protein P0 is the functional equivalent of E.coli protein L10.

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-CEL-156827. L13a-mediated translational silencing of Ceruloplasmin expression.
R-CEL-1799339. SRP-dependent cotranslational protein targeting to membrane.
R-CEL-72689. Formation of a pool of free 40S subunits.
R-CEL-72706. GTP hydrolysis and joining of the 60S ribosomal subunit.
R-CEL-975956. Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC).
R-CEL-975957. Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC).

Names & Taxonomyi

Protein namesi
Recommended name:
60S acidic ribosomal protein P0
Gene namesi
Name:rpa-0
ORF Names:F25H2.10
OrganismiCaenorhabditis elegans
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiF25H2.10; CE09655; WBGene00004408; rla-0.

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Initiator methionineiRemoved1 Publication
ChainiPRO_00001547662 – 31260S acidic ribosomal protein P0Add BLAST311

Post-translational modificationi

Phosphorylated.By similarity

Keywords - PTMi

Phosphoprotein

Proteomic databases

EPDiQ93572.
PaxDbiQ93572.
PeptideAtlasiQ93572.
PRIDEiQ93572.

2D gel databases

World-2DPAGEi0011:Q93572.
0020:Q93572.

Expressioni

Gene expression databases

BgeeiWBGene00004408.

Interactioni

Subunit structurei

P0 forms a pentameric complex by interaction with dimers of P1 and P2.

Protein-protein interaction databases

BioGridi38357. 7 interactors.
DIPiDIP-26018N.
IntActiQ93572. 9 interactors.
MINTiMINT-1046682.
STRINGi6239.F25H2.10.2.

Structurei

3D structure databases

ProteinModelPortaliQ93572.
SMRiQ93572.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiKOG0815. Eukaryota.
COG0244. LUCA.
GeneTreeiENSGT00390000017839.
HOGENOMiHOG000210987.
InParanoidiQ93572.
KOiK02941.
OMAiFFQALQI.
OrthoDBiEOG091G0F47.
PhylomeDBiQ93572.

Family and domain databases

InterProiView protein in InterPro
IPR030670. L10E_eukaryotes.
IPR001790. Ribosomal_L10P.
PfamiView protein in Pfam
PF00466. Ribosomal_L10. 1 hit.
PIRSFiPIRSF039087. L10E. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q93572-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVREDRSTWK ANYFTKLVEL FEEYPKCLLV GVDNVGSKQM QEIRQAMRGH
60 70 80 90 100
AEILMGKNTM IRKALRGHLG KNPSLEKLLP HIVENVGFVF TKEDLGEIRS
110 120 130 140 150
KLLENRKGAP AKAGAIAPCD VKLPPQNTGM GPEKTSFFQA LQIPTKIARG
160 170 180 190 200
TIEILNDVHL IKEGDKVGAS ESALLNMLGV TPFSYGLVVR QVYDDGTLYT
210 220 230 240 250
PEVLDMTTEE LRKRFLSGVR NVASVSLAVN YPTLASVAHS LANGLQNMLG
260 270 280 290 300
VAAVTDVSFK EAETIKAFIA DPSKFAAAAP AAAAAPAAAA PAAKKEEPKE
310
ESDDDMGFGL FD
Length:312
Mass (Da):33,774
Last modified:January 23, 2007 - v3
Checksum:i0D90B15C30BDCB30
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
Z79754 Genomic DNA. Translation: CAB02098.1.
PIRiT21351.
RefSeqiNP_492766.1. NM_060365.7.
UniGeneiCel.20069.

Genome annotation databases

EnsemblMetazoaiF25H2.10; F25H2.10; WBGene00004408.
GeneIDi172943.
KEGGicel:CELE_F25H2.10.
UCSCiF25H2.10.1. c. elegans.

Similar proteinsi

Entry informationi

Entry nameiRLA0_CAEEL
AccessioniPrimary (citable) accession number: Q93572
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: January 23, 2007
Last modified: September 27, 2017
This is version 120 of the entry and version 3 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Caenorhabditis elegans
    Caenorhabditis elegans: entries, gene names and cross-references to WormBase
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families