Unreviewed, UniProtKB/TrEMBL Q934I7 (Q934I7_9SPHI)

Names and origin

Protein names	Submitted name:     MS115, putative beta-agarase EMBL AAK62837.1
Encoded on	Plasmid pSD15 EMBL AAK62837.1
Organism	Microscilla sp. PRE1 EMBL AAK62837.1
Taxonomic identifier	155537 [NCBI]
Taxonomic lineage	Bacteria › Bacteroidetes › Sphingobacteria › Sphingobacteriales › Flexibacteraceae › Microscilla

Protein attributes

Sequence length	1330 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Predicted.

Ontologies

Keywords
Technical term	Plasmid
Gene Ontology (GO)
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q934I7-1 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 083073D8EFCEB28F	FASTA	1,330	143,942
	10 20 30 40 50 60 MYGKVVLFTV LFLGNIFCLY SQGVQVDVNL NVKHSVGGVS DFGRDRHMTV HSSLTEPDWQ 70 80 90 100 110 120 GEEAKMDYLL TDLDTYLGRD NGSATWKFAS TPQDPNNPHH PSVDSMQAFG DWLKGEYESL 130 140 150 160 170 180 TNRHQYESRA SGMIMGTNAH PTYPTLSWYA NGSTWTDPQW QPKDVQTSAD WVTEYLDKFF 190 200 210 220 230 240 AHSPSVDGEP LPKYWEVVNE PDMEYMTGKF MVTSQEKIWE YHNLVAQGVK ERLGTDAPLI 250 260 270 280 290 300 GGMTWGLHDL FAGDGLSRYQ PDYLDQYLDA ETAEFYRNAA ATQWPGNQNQ PWYQWDVQWK 310 320 330 340 350 360 GFIDAAGANM DFYSVHFYDW PTYNASGGAV RSGGHVEATL DMLEWYDVQK FGVSNRKPVV 370 380 390 400 410 420 ISEYGAVQGS WTYLPHDNRY DWECIKPFNS MLMQFLERPD YIIYTLPFTP IKAQWGDVDQ 430 440 450 460 470 480 NGDGTPEYVY QYKLMRDDDH DGNWEWSDYI KFYELWSEVK GTRIDTKSTD PDIQIDAYVD 490 500 510 520 530 540 GKDVFLILNN LENQATTIHL NLYEDFGNNV QNVNIKHLHL TGTSTVTLDN NDHATAPESV 550 560 570 580 590 600 QLAGDGTMVI KYTYGSAVNI NHNSIEKKFY GESLSGTVPN RVSIPNGEMT MQINGVDVPA 610 620 630 640 650 660 DASKAEAMLR ITCALYNDDD NQVGHLSIDK LTVNGTEIET PLDWRGTNQV RNRYFSTLEI 670 680 690 700 710 720 PVPVGLLQTN NTFTVDFHHV GEVAVVNLQT WEFSKVPGRS TSSDPVAVTG VTVSPGSPTV 730 740 750 760 770 780 AQGSTVQMTA HVQPTNATDQ SVTWSSSNAN VASVNASGEV TGIAQGTATI TATTNDGGFI 790 800 810 820 830 840 ASTQVMVTTG DVDVTGVSVT PTSASLLVGQ SIDLTETVSP TNATDKSVTW TTSNSAVVTV 850 860 870 880 890 900 NGSGLVTAKG NGSATVTVTT NDGGFTAQSA VTVTTGGGGS AIVIEAESFT STGGTTDDSP 910 920 930 940 950 960 YGGPGIGVNN AGTNINYVNS EDWAEYGINV SEAGTYQIEY QISTPSNNAQ VRFELDGNVV 970 980 990 1000 1010 1020 STDNVPNNGQ WDSYTKLIAG STISTLSTGS HTVRLVASGA NAWQWNLDKV TLTKTGSSTV 1030 1040 1050 1060 1070 1080 NVTGVSASPT NVSLSIGGST DLTETVNPGN ATDKSVSWSS NNTAVATVDA NGLVSAVGAG 1090 1100 1110 1120 1130 1140 TAVITVTTSD GGHTATCSVT VSGGNSVELT IQAEDFATTG GTHDGFQVYS VNGVTATNWN 1150 1160 1170 1180 1190 1200 QTGDWADYSV TIPEAGDYSI EYFMGTTVNG AAVTISVDGA VQRTDAVPNN GNWDVFESLK 1210 1220 1230 1240 1250 1260 VGGRISLNAG SHTIRLLGDG TNGWEWNMDR FVLSKGAASS RVESSSSSQI VNQGISIYPV 1270 1280 1290 1300 1310 1320 PADDKITVRG LAPDLYQLTI SNVSGKIVRK MSVEGPNDYI LDVGDLKTGV YFLHFHGSKT 1330 TFNARIIMQH

References

[1]

"Sequence analysis of a 101-kilobase plasmid required for agar degradation by a Microscilla isolate." Zhong Z., Toukdarian A., Helinski D., Knauf V., Sykes S., Wilkinson J.E., O'Bryne C., Shea T., DeLoughery C., Caspi R. Appl. Environ. Microbiol. 67:5771-5779(2001) [PubMed: 11722934] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: PRE1 EMBL AAK62837.1.

Cross-references

Sequence databases
EMBLGenBankDDBJ	AF339846 Genomic DNA. Translation: AAK62837.1.
RefSeq	NP_116803.1.
3D structure databases
ModBase	Search...
Protein family/group databases
CAZy	CBM6. Carbohydrate-Binding Module Family 6. GH86. Glycoside Hydrolase Family 86.
Genome annotation databases
GeneID	3207704.
Family and domain databases
InterPro	IPR003343. Big_2. IPR005084. CBM_6. IPR006584. Cellulose_bd_IV. [Graphical view]
Pfam	PF02368. Big_2. 3 hits. PF03422. CBM_6. 2 hits. [Graphical view]
SMART	SM00635. BID_2. 3 hits. SM00606. CBD_IV. 2 hits. [Graphical view]
PROSITE	PS51175. CBM6. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q934I7_9SPHI

Accession

Primary (citable) accession number: Q934I7

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	April 14, 2009
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)