Unreviewed, UniProtKB/TrEMBL Q934G8 (Q934G8_CLOPE)

Names and origin

Protein names

Submitted name:
    GlcNAc-alpha-1,4-Gal-releasing endo-beta-galactosidase EMBL BAB69460.1

Gene names

Name:

gngC EMBL BAB69460.1

Organism

Clostridium perfringens EMBL BAB69460.1

Taxonomic identifier

1502 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Clostridium

Protein attributes

Sequence length	420 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

Ontologies

Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	18 – 420	403	Potential EMBL BAB69460.1		PRO_5000049697

Sequences

	Sequence		Length	Mass (Da)
	Q934G8-1 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: F288D16FA0E5FB6D	FASTA	420	49,377
	10 20 30 40 50 60 MFVFMLLLLL PFTISKAKDF PANPIEKAGY KLDFSDEFNG PTLDREKWTD YYLPHWCKDP 70 80 90 100 110 120 ESAKANYRFE NGSLVEYITE DQKPWCPEHD GTVRSSAIMS FDKSWIHNFS GTTDNHERNE 130 140 150 160 170 180 WRGYTTKYGY FEIRAKLSNT GGGGHQAWWM VGMQDDTNDW FNSKQTGEID ILETFFSKKD 190 200 210 220 230 240 TWRIAAYGWN DPNFQTSWTI SEDKVPSGDP TSEYHIYAME WTPTALKFYY DNELFKVIYG 250 260 270 280 290 300 SPDYEMGTIL NIYTDAGSGA HNDVWPKEWA IDYMRVWKPV DGYKESESLN NYLIRNRQTG 310 320 330 340 350 360 KFLYIEENND KVSYGDITLK NEKNAKWSKE YRDGYTLLKN NETGEYLNIE NQTGYIEHGK 370 380 390 400 410 420 VPKTWWSAQW SEVPVDGYTR FVNRWKPNMS IHTESYEGVL QYGNVPNTYW TSQWQLIPVE

References

[1]	"Characterization of a novel endo-beta-galactosidase specific for releasing the disaccharide GlcNAc alpha 1-->4Gal from glycoconjugates." Ashida H., Maskos K., Li S.C., Li Y.T. Biochemistry 41:2388-2395(2002) [PubMed: 11841232] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: ATCC10543 EMBL BAB69460.1.
[2]	"Three-dimensional structure of GlcNAcalpha1-4Gal releasing endo-beta-galactosidase from Clostridium perfringens." Tempel W., Liu Z.J., Horanyi P.S., Deng L., Lee D., Newton M.G., Rose J.P., Ashida H., Li S.C., Li Y.T., Wang B.C. Proteins 59:141-144(2005) [PubMed: 15688452] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.82 ANGSTROMS).

Cross-references

Sequence databases

EMBLGenBankDDBJ

AB059351 Genomic DNA. Translation: BAB69460.1.

3D structure databases

PDBPDBe

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1UPS	X-ray	1.82	A/B	1-420	[»]

SMR

Q934G8. Positions 237-557.

ModBase

Search...

Protein family/group databases

CAZy

GH16. Glycoside Hydrolase Family 16.

Family and domain databases

InterPro

IPR013320. ConA-like_subgrp.
IPR000757. Glyco_hydro_16.
[Graphical view]

Gene3D

G3DSA:2.60.120.200. ConA_like_subgrp. 1 hit.

Pfam

PF00722. Glyco_hydro_16. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

Q934G8_CLOPE

Accession

Primary (citable) accession number: Q934G8

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	June 16, 2009
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)