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Protein
Submitted name:

Putative transposase

Gene
N/A
Organism
Helicobacter pylori (Campylobacter pylori)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative transposaseImported
Submitted name:
TransposaseImported
Submitted name:
Transposase OrfAImported
OrganismiHelicobacter pylori (Campylobacter pylori)Imported
Taxonomic identifieri210 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2A6MX-ray2.40A/B1-155[»]
2A6OX-ray2.60A/B1-155[»]
2VHGX-ray2.90A/B2-155[»]
2VICX-ray2.35A/B2-155[»]
2VIHX-ray2.10A/B2-155[»]
2VJUX-ray2.40A/B2-155[»]
2VJVX-ray1.90A/B2-155[»]
SMRiQ933Z0. Positions 4-155.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di3.30.70.1290. 1 hit.
InterProiIPR002686. Transposase_17.
[Graphical view]
PfamiPF01797. Y1_Tnp. 1 hit.
[Graphical view]
SMARTiSM01321. Y1_Tnp. 1 hit.
[Graphical view]
SUPFAMiSSF143422. SSF143422. 1 hit.

Sequencei

Sequence statusi: Complete.

Q933Z0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSNAVLYKSN HNVVYSCKYH IVWCPKYRRK VLVGAVEMRL KEIIQEVAKE
60 70 80 90 100
LRVEIIEMQT DKDHIHILAD IDPSFGVMKF IKTAKGRSSR ILRQEFNHLK
110 120 130 140 150
TKLPTLWTNS CFISTVGGAP LNVVKQYIEN QQNSNRPKQK EKWKSYVDNL

QTKAL
Length:155
Mass (Da):18,075
Last modified:December 1, 2001 - v1
Checksum:i20500740808FC112
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF357223 Genomic DNA. Translation: AAK49528.1.
AF411939 Genomic DNA. Translation: AAL06572.1.
AF411946 Genomic DNA. Translation: AAL06586.1.
AY487825 Genomic DNA. Translation: AAR83264.1.
AY487825 Genomic DNA. Translation: AAR83269.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF357223 Genomic DNA. Translation: AAK49528.1.
AF411939 Genomic DNA. Translation: AAL06572.1.
AF411946 Genomic DNA. Translation: AAL06586.1.
AY487825 Genomic DNA. Translation: AAR83264.1.
AY487825 Genomic DNA. Translation: AAR83269.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2A6MX-ray2.40A/B1-155[»]
2A6OX-ray2.60A/B1-155[»]
2VHGX-ray2.90A/B2-155[»]
2VICX-ray2.35A/B2-155[»]
2VIHX-ray2.10A/B2-155[»]
2VJUX-ray2.40A/B2-155[»]
2VJVX-ray1.90A/B2-155[»]
SMRiQ933Z0. Positions 4-155.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di3.30.70.1290. 1 hit.
InterProiIPR002686. Transposase_17.
[Graphical view]
PfamiPF01797. Y1_Tnp. 1 hit.
[Graphical view]
SMARTiSM01321. Y1_Tnp. 1 hit.
[Graphical view]
SUPFAMiSSF143422. SSF143422. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Transposable element ISHp608 of Helicobacter pylori: nonrandom geographic distribution, functional organization, and insertion specificity."
    Kersulyte D., Velapatino B., Dailide G., Mukhopadhyay A.K., Ito Y., Cahuayme L., Parkinson A.J., Gilman R.H., Berg D.E.
    J. Bacteriol. 184:992-1002(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: India49Imported, PeCan4AImported and PeruCan2AImported.
  2. "Sequence organization and insertion specificity of the novel chimeric ISHp609 transposable element of Helicobacter pylori."
    Kersulyte D., Kalia A., Zhang M., Lee H.K., Subramaniam D., Kiuduliene L., Chalkauskas H., Berg D.E.
    J. Bacteriol. 186:7521-7528(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: HUP-B43Imported.
  3. "Active site sharing and subterminal hairpin recognition in a new class of DNA transposases."
    Ronning D.R., Guynet C., Ton-Hoang B., Perez Z.N., Ghirlando R., Chandler M., Dyda F.
    Mol. Cell 20:143-154(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS).
  4. "Mechanism of IS200/IS605 family DNA transposases: activation and transposon-directed target site selection."
    Barabas O., Ronning D.R., Guynet C., Hickman A.B., Ton-Hoang B., Chandler M., Dyda F.
    Cell 132:208-220(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 2-155.

Entry informationi

Entry nameiQ933Z0_HELPX
AccessioniPrimary (citable) accession number: Q933Z0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: May 11, 2016
This is version 63 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.