Q933Z0 (Q933Z0_HELPX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names	Submitted name: Putative transposase EMBL AAR83264.1 Submitted name: Transposase EMBL AAK49528.1 Submitted name: Transposase OrfA EMBL AAL06586.1
Organism	Helicobacter pylori (Campylobacter pylori) EMBL AAL06586.1
Taxonomic identifier	210 [NCBI]
Taxonomic lineage	Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter

Protein attributes

Sequence length	155 AA.
Sequence status	Complete.
Protein existence	Evidence at protein level

Ontologies

Keywords
Technical term	3D-structure PDB 2VJV PDB 2VIC PDB 2VJU PDB 2A6O PDB 2VIH PDB 2A6M PDB 2VHG
Gene Ontology (GO)
Biological process	transposition, DNA-mediated Inferred from electronic annotation. Source: InterPro
Molecular function	DNA binding Inferred from electronic annotation. Source: InterPro transposase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q933Z0 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 20500740808FC112	FASTA	155	18,075
	10 20 30 40 50 60 MSNAVLYKSN HNVVYSCKYH IVWCPKYRRK VLVGAVEMRL KEIIQEVAKE LRVEIIEMQT 70 80 90 100 110 120 DKDHIHILAD IDPSFGVMKF IKTAKGRSSR ILRQEFNHLK TKLPTLWTNS CFISTVGGAP 130 140 150 LNVVKQYIEN QQNSNRPKQK EKWKSYVDNL QTKAL

References

[1]	"Sequence organization and insertion specificity of the novel chimeric ISHp609 transposable element of Helicobacter pylori." Kersulyte D., Kalia A., Zhang M., Lee H.K., Subramaniam D., Kiuduliene L., Chalkauskas H., Berg D.E. J. Bacteriol. 186:7521-7528(2004) [PubMed: 15516563] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: HUP-B43 EMBL AAR83264.1.
[2]	"Active site sharing and subterminal hairpin recognition in a new class of DNA transposases." Ronning D.R., Guynet C., Ton-Hoang B., Perez Z.N., Ghirlando R., Chandler M., Dyda F. Mol. Cell 20:143-154(2005) [PubMed: 16209952] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (2.40 ANGSTROMS).
[3]	"Mechanism of IS200/IS605 family DNA transposases: activation and transposon-directed target site selection." Barabas O., Ronning D.R., Guynet C., Hickman A.B., Ton-Hoang B., Chandler M., Dyda F. Cell 132:208-220(2008) [PubMed: 18243097] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.90 ANGSTROMS) OF 2-155.
[4]	"Transposable element ISHp608 of Helicobacter pylori: nonrandom geographic distribution, functional organization, and insertion specificity." Kersulyte D., Velapatino B., Dailide G., Mukhopadhyay A.K., Ito Y., Cahuayme L., Parkinson A.J., Gilman R.H., Berg D.E. J. Bacteriol. 184:992-1002(2002) [PubMed: 11807059] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: India49 EMBL AAL06572.1, PeCan4A EMBL AAL06586.1 and PeruCan2A EMBL AAK49528.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ

AF357223 Genomic DNA. Translation: AAK49528.1.
AF411939 Genomic DNA. Translation: AAL06572.1.
AF411946 Genomic DNA. Translation: AAL06586.1.
AY487825 Genomic DNA. Translation: AAR83264.1.
AY487825 Genomic DNA. Translation: AAR83269.1.

3D structure databases

PDBe
RCSB PDB
PDBj

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
2A6M	X-ray	2.40	A/B	1-155	[»]
2A6O	X-ray	2.60	A/B	1-155	[»]
2VHG	X-ray	2.90	A/B	2-155	[»]
2VIC	X-ray	2.35	A/B	2-155	[»]
2VIH	X-ray	2.10	A/B	2-155	[»]
2VJU	X-ray	2.40	A/B	2-155	[»]
2VJV	X-ray	1.90	A/B	2-155	[»]

ProteinModelPortal

Q933Z0.

SMR

Q933Z0. Positions 4-155.

ModBase

Search...

Protocols and materials databases

StructuralBiologyKnowledgebase

Search...

Family and domain databases

InterPro

IPR002686. Transposase_17.
[Graphical view]

Gene3D

G3DSA:3.30.70.1290. G3DSA:3.30.70.1290. 1 hit.

Pfam

PF01797. Y1_Tnp. 1 hit.
[Graphical view]

SUPFAM

SSF143422. SSF143422. 1 hit.

ProtoNet

Search...

Entry information

Entry name

Q933Z0_HELPX

Accession

Primary (citable) accession number: Q933Z0

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	December 14, 2011
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)