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Q92ZK3

- NODM_RHIME

UniProt

Q92ZK3 - NODM_RHIME

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Protein
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]
Gene
nodM, RA0482, SMa0878
Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Involved in the production of the root hair deformation (HAD) factor specifically on medicago By similarity.UniRule annotation

Catalytic activityi

L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei2 – 21Nucleophile; for GATase activity By similarity
Active sitei603 – 6031For Fru-6P isomerization activity By similarity

GO - Molecular functioni

  1. carbohydrate binding Source: InterPro
  2. glutamine-fructose-6-phosphate transaminase (isomerizing) activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbohydrate biosynthetic process Source: InterPro
  2. glutamine metabolic process Source: UniProtKB-HAMAP
  3. nodulation Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Aminotransferase, Transferase

Keywords - Biological processi

Nodulation

Enzyme and pathway databases

BioCyciSMEL266834:GJF6-5490-MONOMER.

Protein family/group databases

MEROPSiC44.971.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC:2.6.1.16)
Short name:
GFAT
Alternative name(s):
Nodulation protein M
Gene namesi
Name:nodM
Ordered Locus Names:RA0482
ORF Names:SMa0878
Encoded oniPlasmid pSymA (megaplasmid 1)0 Publication
OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Taxonomic identifieri266834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001976: Plasmid pSymA

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 608607Glutamine--fructose-6-phosphate aminotransferase [isomerizing]UniRule annotation
PRO_0000135437Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi266834.SMa0878.

Structurei

3D structure databases

ProteinModelPortaliQ92ZK3.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini2 – 217216Glutamine amidotransferase type-2
Add
BLAST
Domaini281 – 422142SIS 1
Add
BLAST
Domaini456 – 598143SIS 2
Add
BLAST

Sequence similaritiesi

Contains 2 SIS domains.

Keywords - Domaini

Glutamine amidotransferase, Repeat

Phylogenomic databases

eggNOGiCOG0449.
HOGENOMiHOG000258896.
KOiK00820.
OMAiSVFETQT.
OrthoDBiEOG6KT2Q1.

Family and domain databases

Gene3Di3.60.20.10. 1 hit.
HAMAPiMF_00164. GlmS.
InterProiIPR017932. GATase_2_dom.
IPR005855. GlmS_trans.
IPR029055. Ntn_hydrolases_N.
IPR001347. SIS.
[Graphical view]
PANTHERiPTHR10937:SF0. PTHR10937:SF0. 1 hit.
PfamiPF01380. SIS. 2 hits.
[Graphical view]
SUPFAMiSSF56235. SSF56235. 1 hit.
TIGRFAMsiTIGR01135. glmS. 1 hit.
PROSITEiPS51278. GATASE_TYPE_2. 1 hit.
PS51464. SIS. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q92ZK3-1 [UniParc]FASTAAdd to Basket

« Hide

MCGIVGIVGN QPVSERLVEA LKRLEYRGYD SAGVATIDAG TLQRRRAEGK    50
LVNLESRLRE EPLAGTIGIA HTRWATHGAP TERNAHPHFT EGVAVVHNGI 100
IENFAELKDE LAAGGAEFQT ETDTEVVAHL LTKYRRDGLG RREAMHAMLK 150
RVKGAYALAV LFEDDPSTIM AARNGPPLAI GHGSGEMFLG SDAIALAPFT 200
NEITYLIDGD WAVIGKTGVH IFDFDGNVVE RPRQISTAAA FLVDKGNHRH 250
FMEKEIYEQP EVIAHALGHY VNFIENRVVP ISDAIDFGKV PSLAISACGT 300
AYLAGLIGKY WFERYARLPV EIDVASEFRY REIPLSPQSA ALFISQSGET 350
ADTLASLRYC KEHGLKIGAV VNARESTIAR ESDAVFPILA GPEIGVASTK 400
AFTCQLAVLA ALAVGAGKAR GTISGEEEQA LVKSLAEMPR IMGQVLNSIQ 450
PKIESLSREL SKCHDVLYLG RGTSFPLAME GALKLKEISY IHAEGYAAGE 500
LKHGPIALID ENMPVIVIAP HDRFFDKTVS NMQEVAARGG RIILITDEKG 550
AAASKLDTMH TIVLPEVDEI IAPMIFSLPL QLLAYHTAVF MGTDVDQPRN 600
LAKSVTVE 608
Length:608
Mass (Da):65,919
Last modified:January 23, 2007 - v3
Checksum:i91BC90051FEC23F4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE006469 Genomic DNA. Translation: AAK65140.1.
PIRiB95322.
RefSeqiNP_435728.1. NC_003037.1.

Genome annotation databases

EnsemblBacteriaiAAK65140; AAK65140; SMa0878.
GeneIDi1235518.
KEGGisme:SMa0878.
PATRICi23627426. VBISinMel96828_0492.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AE006469 Genomic DNA. Translation: AAK65140.1 .
PIRi B95322.
RefSeqi NP_435728.1. NC_003037.1.

3D structure databases

ProteinModelPortali Q92ZK3.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266834.SMa0878.

Protein family/group databases

MEROPSi C44.971.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAK65140 ; AAK65140 ; SMa0878 .
GeneIDi 1235518.
KEGGi sme:SMa0878.
PATRICi 23627426. VBISinMel96828_0492.

Phylogenomic databases

eggNOGi COG0449.
HOGENOMi HOG000258896.
KOi K00820.
OMAi SVFETQT.
OrthoDBi EOG6KT2Q1.

Enzyme and pathway databases

BioCyci SMEL266834:GJF6-5490-MONOMER.

Family and domain databases

Gene3Di 3.60.20.10. 1 hit.
HAMAPi MF_00164. GlmS.
InterProi IPR017932. GATase_2_dom.
IPR005855. GlmS_trans.
IPR029055. Ntn_hydrolases_N.
IPR001347. SIS.
[Graphical view ]
PANTHERi PTHR10937:SF0. PTHR10937:SF0. 1 hit.
Pfami PF01380. SIS. 2 hits.
[Graphical view ]
SUPFAMi SSF56235. SSF56235. 1 hit.
TIGRFAMsi TIGR01135. glmS. 1 hit.
PROSITEi PS51278. GATASE_TYPE_2. 1 hit.
PS51464. SIS. 2 hits.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021.

Entry informationi

Entry nameiNODM_RHIME
AccessioniPrimary (citable) accession number: Q92ZK3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2002
Last sequence update: January 23, 2007
Last modified: June 11, 2014
This is version 86 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Plasmid

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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