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Q92ZK3

- NODM_RHIME

UniProt

Q92ZK3 - NODM_RHIME

Protein

Glutamine--fructose-6-phosphate aminotransferase [isomerizing]

Gene

nodM

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi
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    • History
      Entry version 87 (01 Oct 2014)
      Sequence version 3 (23 Jan 2007)
      Previous versions | rss
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    Functioni

    Involved in the production of the root hair deformation (HAD) factor specifically on medicago.By similarity

    Catalytic activityi

    L-glutamine + D-fructose 6-phosphate = L-glutamate + D-glucosamine 6-phosphate.

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei2 – 21Nucleophile; for GATase activityBy similarity
    Active sitei603 – 6031For Fru-6P isomerization activityBy similarity

    GO - Molecular functioni

    1. carbohydrate binding Source: InterPro
    2. glutamine-fructose-6-phosphate transaminase (isomerizing) activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. carbohydrate biosynthetic process Source: InterPro
    2. glutamine metabolic process Source: UniProtKB-HAMAP
    3. nodulation Source: UniProtKB-KW

    Keywords - Molecular functioni

    Aminotransferase, Transferase

    Keywords - Biological processi

    Nodulation

    Enzyme and pathway databases

    BioCyciSMEL266834:GJF6-5490-MONOMER.

    Protein family/group databases

    MEROPSiC44.971.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamine--fructose-6-phosphate aminotransferase [isomerizing] (EC:2.6.1.16)
    Short name:
    GFAT
    Alternative name(s):
    Nodulation protein M
    Gene namesi
    Name:nodM
    Ordered Locus Names:RA0482
    ORF Names:SMa0878
    Encoded oniPlasmid pSymA (megaplasmid 1)0 Publication
    OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
    Taxonomic identifieri266834 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001976: Plasmid pSymA

    Subcellular locationi

    Cytoplasm By similarity

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 608607Glutamine--fructose-6-phosphate aminotransferase [isomerizing]PRO_0000135437Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi266834.SMa0878.

    Structurei

    3D structure databases

    ProteinModelPortaliQ92ZK3.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini2 – 217216Glutamine amidotransferase type-2Add
    BLAST
    Domaini281 – 422142SIS 1Add
    BLAST
    Domaini456 – 598143SIS 2Add
    BLAST

    Sequence similaritiesi

    Contains 2 SIS domains.Curated

    Keywords - Domaini

    Glutamine amidotransferase, Repeat

    Phylogenomic databases

    eggNOGiCOG0449.
    HOGENOMiHOG000258896.
    KOiK00820.
    OMAiSVFETQT.
    OrthoDBiEOG6KT2Q1.

    Family and domain databases

    Gene3Di3.60.20.10. 1 hit.
    HAMAPiMF_00164. GlmS.
    InterProiIPR017932. GATase_2_dom.
    IPR005855. GlmS_trans.
    IPR029055. Ntn_hydrolases_N.
    IPR001347. SIS.
    [Graphical view]
    PANTHERiPTHR10937:SF0. PTHR10937:SF0. 1 hit.
    PfamiPF01380. SIS. 2 hits.
    [Graphical view]
    SUPFAMiSSF56235. SSF56235. 1 hit.
    TIGRFAMsiTIGR01135. glmS. 1 hit.
    PROSITEiPS51278. GATASE_TYPE_2. 1 hit.
    PS51464. SIS. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q92ZK3-1 [UniParc]FASTAAdd to Basket

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    MCGIVGIVGN QPVSERLVEA LKRLEYRGYD SAGVATIDAG TLQRRRAEGK    50
    LVNLESRLRE EPLAGTIGIA HTRWATHGAP TERNAHPHFT EGVAVVHNGI 100
    IENFAELKDE LAAGGAEFQT ETDTEVVAHL LTKYRRDGLG RREAMHAMLK 150
    RVKGAYALAV LFEDDPSTIM AARNGPPLAI GHGSGEMFLG SDAIALAPFT 200
    NEITYLIDGD WAVIGKTGVH IFDFDGNVVE RPRQISTAAA FLVDKGNHRH 250
    FMEKEIYEQP EVIAHALGHY VNFIENRVVP ISDAIDFGKV PSLAISACGT 300
    AYLAGLIGKY WFERYARLPV EIDVASEFRY REIPLSPQSA ALFISQSGET 350
    ADTLASLRYC KEHGLKIGAV VNARESTIAR ESDAVFPILA GPEIGVASTK 400
    AFTCQLAVLA ALAVGAGKAR GTISGEEEQA LVKSLAEMPR IMGQVLNSIQ 450
    PKIESLSREL SKCHDVLYLG RGTSFPLAME GALKLKEISY IHAEGYAAGE 500
    LKHGPIALID ENMPVIVIAP HDRFFDKTVS NMQEVAARGG RIILITDEKG 550
    AAASKLDTMH TIVLPEVDEI IAPMIFSLPL QLLAYHTAVF MGTDVDQPRN 600
    LAKSVTVE 608
    Length:608
    Mass (Da):65,919
    Last modified:January 23, 2007 - v3
    Checksum:i91BC90051FEC23F4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006469 Genomic DNA. Translation: AAK65140.1.
    PIRiB95322.
    RefSeqiNP_435728.1. NC_003037.1.

    Genome annotation databases

    EnsemblBacteriaiAAK65140; AAK65140; SMa0878.
    GeneIDi1235518.
    KEGGisme:SMa0878.
    PATRICi23627426. VBISinMel96828_0492.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006469 Genomic DNA. Translation: AAK65140.1 .
    PIRi B95322.
    RefSeqi NP_435728.1. NC_003037.1.

    3D structure databases

    ProteinModelPortali Q92ZK3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 266834.SMa0878.

    Protein family/group databases

    MEROPSi C44.971.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAK65140 ; AAK65140 ; SMa0878 .
    GeneIDi 1235518.
    KEGGi sme:SMa0878.
    PATRICi 23627426. VBISinMel96828_0492.

    Phylogenomic databases

    eggNOGi COG0449.
    HOGENOMi HOG000258896.
    KOi K00820.
    OMAi SVFETQT.
    OrthoDBi EOG6KT2Q1.

    Enzyme and pathway databases

    BioCyci SMEL266834:GJF6-5490-MONOMER.

    Family and domain databases

    Gene3Di 3.60.20.10. 1 hit.
    HAMAPi MF_00164. GlmS.
    InterProi IPR017932. GATase_2_dom.
    IPR005855. GlmS_trans.
    IPR029055. Ntn_hydrolases_N.
    IPR001347. SIS.
    [Graphical view ]
    PANTHERi PTHR10937:SF0. PTHR10937:SF0. 1 hit.
    Pfami PF01380. SIS. 2 hits.
    [Graphical view ]
    SUPFAMi SSF56235. SSF56235. 1 hit.
    TIGRFAMsi TIGR01135. glmS. 1 hit.
    PROSITEi PS51278. GATASE_TYPE_2. 1 hit.
    PS51464. SIS. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 1021.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 1021.

    Entry informationi

    Entry nameiNODM_RHIME
    AccessioniPrimary (citable) accession number: Q92ZK3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 23, 2002
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 87 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Plasmid, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3