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Q92XF1

- Q92XF1_RHIME

UniProt

Q92XF1 - Q92XF1_RHIME

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Protein
Submitted name:

DNA ligase (ATP)

Gene

SM_b20008

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSMEL266834:GJF6-3443-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligase (ATP)Imported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:SM_b20008Imported
Encoded oniPlasmid pSymBImported
OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)Imported
Taxonomic identifieri266834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001976: Plasmid pSymB

Interactioni

Protein-protein interaction databases

STRINGi266834.SM_b20008.

Structurei

3D structure databases

ProteinModelPortaliQ92XF1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Q92XF1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MASSAHGKPT KKAAPSSAAK KAGGFPLPVS TAPMEARSAT ELPGGDAWQY
60 70 80 90 100
EPKWDGFRCL AFKSGDEVDI RAKSGKPLGR FFPEIVALLR RLEPDMFVLD
110 120 130 140 150
GELVIEVDGR LSFDALQMRL HPAASRVQKL SQETPAKLIL FDMLAGTDGT
160 170 180 190 200
ILTGEPLQTR RACLEAFAKK NAVAEMLESS PFTLDIKEAE RWLTSWEAGA
210 220 230 240 250
TDGVVAKRRD GVYECGERAM VKVKRLKTAD CVVGGFRYES DSSLVGSLLL
260 270 280 290 300
GLYDTEGLLN HVGFTATISD KERPALTNQL EALREPPGFT GKAPGGPSRW
310 320 330 340 350
SSERSGEWEP VRPELVVEVR FDHVSNRRFR HGTKLMRWRP DKDPRQCTYQ

QIMPS
Length:355
Mass (Da):39,207
Last modified:December 1, 2001 - v1
Checksum:i9340619C5EFE9C56
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL591985 Genomic DNA. Translation: CAC48411.1.
PIRiC95843.
RefSeqiNP_436551.1. NC_003078.1.

Genome annotation databases

EnsemblBacteriaiCAC48411; CAC48411; SM_b20008.
GeneIDi1236424.
KEGGisme:SM_b20008.
PATRICi23636385. VBISinMel96828_4914.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL591985 Genomic DNA. Translation: CAC48411.1 .
PIRi C95843.
RefSeqi NP_436551.1. NC_003078.1.

3D structure databases

ProteinModelPortali Q92XF1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266834.SM_b20008.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAC48411 ; CAC48411 ; SM_b20008 .
GeneIDi 1236424.
KEGGi sme:SM_b20008.
PATRICi 23636385. VBISinMel96828_4914.

Phylogenomic databases

HOGENOMi HOG000222508.
KOi K01971.
OMAi HERTADC.
OrthoDBi EOG63NMFT.

Enzyme and pathway databases

BioCyci SMEL266834:GJF6-3443-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The complete sequence of the 1,683-kb pSymB megaplasmid from the N2-fixing endosymbiont Sinorhizobium meliloti."
    Finan T.M., Weidner S., Wong K., Buhrmester J., Chain P., Vorhoelter F.J., Hernandez-Lucas I., Becker A., Cowie A., Gouzy J., Golding B., Puehler A.
    Proc. Natl. Acad. Sci. U.S.A. 98:9889-9894(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021Imported.

Entry informationi

Entry nameiQ92XF1_RHIME
AccessioniPrimary (citable) accession number: Q92XF1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: October 1, 2014
This is version 76 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3