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Protein
Submitted name:

Plasmid pSymB

Gene

SM_b21257

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciSMEL266834:GJF6-4197-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Plasmid pSymBImported
Gene namesi
ORF Names:SM_b21257Imported
Encoded oniPlasmid pSymBImported
OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)Imported
Taxonomic identifieri266834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001976 Componenti: Plasmid pSymB

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliQ92VE5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000271557.
KOiK01768.
OMAiMSACATG.
OrthoDBiEOG69GZH8.

Family and domain databases

Gene3Di3.30.70.1230. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR029787. Nucleotide_cyclase.
[Graphical view]
SUPFAMiSSF55073. SSF55073. 1 hit.

Sequencei

Sequence statusi: Complete.

Q92VE5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSPINDNVSE ILLDKVADWL MRTSLSDETL ETIVRGFCER LAAAGLPLMR
60 70 80 90 100
VHLSFSMLHP LYDALGFTWW RGQGIEVSGL RHEELALNPE RFLHSPYYYL
110 120 130 140 150
LSNNLDHVRR RIDPALPSEF PIFDELKEQG ATDYIAFMQP LGAESEHGMV
160 170 180 190 200
GSWTTDRQGG FSDDVIAALL RLQNHLAIAA KVAVLGKLAD NMLTTYLGAN
210 220 230 240 250
AGRRVMSGQV RRGDGETVRA VLVMADMRQS TMLAEKEGRQ AYIESLNGFF
260 270 280 290 300
DAIATPFNRN GGQILSFIGD GFIGVYPCGR HKEPSEMASR ERSPPWARRR
310 320 330
RAWPPSTRNA RGRAATLSAT ASPCMSETSC SAMSACATG
Length:339
Mass (Da):37,457
Last modified:December 1, 2001 - v1
Checksum:i306E0A8F2181407B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591985 Genomic DNA. Translation: CAC49161.1.
PIRiA95937.
RefSeqiNP_437301.1. NC_003078.1.
WP_010975621.1. NC_003078.1.

Genome annotation databases

EnsemblBacteriaiCAC49161; CAC49161; SM_b21257.
GeneIDi1237092.
KEGGisme:SM_b21257.
PATRICi23637939. VBISinMel96828_5691.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591985 Genomic DNA. Translation: CAC49161.1.
PIRiA95937.
RefSeqiNP_437301.1. NC_003078.1.
WP_010975621.1. NC_003078.1.

3D structure databases

ProteinModelPortaliQ92VE5.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAC49161; CAC49161; SM_b21257.
GeneIDi1237092.
KEGGisme:SM_b21257.
PATRICi23637939. VBISinMel96828_5691.

Phylogenomic databases

HOGENOMiHOG000271557.
KOiK01768.
OMAiMSACATG.
OrthoDBiEOG69GZH8.

Enzyme and pathway databases

BioCyciSMEL266834:GJF6-4197-MONOMER.

Family and domain databases

Gene3Di3.30.70.1230. 1 hit.
InterProiIPR001054. A/G_cyclase.
IPR029787. Nucleotide_cyclase.
[Graphical view]
SUPFAMiSSF55073. SSF55073. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "The complete sequence of the 1,683-kb pSymB megaplasmid from the N2-fixing endosymbiont Sinorhizobium meliloti."
    Finan T.M., Weidner S., Wong K., Buhrmester J., Chain P., Vorholter F.J., Hernandez-Lucas I., Becker A., Cowie A., Gouzy J., Golding B., Puhler A.
    Proc. Natl. Acad. Sci. U.S.A. 98:9889-9894(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021Imported.

Entry informationi

Entry nameiQ92VE5_RHIME
AccessioniPrimary (citable) accession number: Q92VE5
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: June 24, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.