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Q92UC4

- Q92UC4_RHIME

UniProt

Q92UC4 - Q92UC4_RHIME

Protein
Submitted name:

Putative ATP-dependent DNA ligase protein

Gene

SM_b20912

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 75 (01 Oct 2014)
      Sequence version 1 (01 Dec 2001)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSMEL266834:GJF6-4644-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative ATP-dependent DNA ligase proteinImported (EC:6.5.1.1Imported)
    Gene namesi
    ORF Names:SM_b20912Imported
    Encoded oniPlasmid pSymBImported
    OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)Imported
    Taxonomic identifieri266834 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001976: Plasmid pSymB

    Interactioni

    Protein-protein interaction databases

    STRINGi266834.SM_b20912.

    Structurei

    3D structure databases

    ProteinModelPortaliQ92UC4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiHARWVEP.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q92UC4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MARASSKKPR DTPPLDPMPA RIDPCLASLV DRPPKGPDWA FEVKWDGYRI    50
    AVHIEPGRVR ILTRGGYDWT ERFPTIVDDA RRLAVKTAIL DGEAVVLDDK 100
    GRSDFGMLQR ALGRLPSAVE AGAIVFYAFD LLYLDGHDLR RLPLRERRRL 150
    LEPLVAAREG AVRLSEELQA DGDEFFRVAC AHGLEGIIAK HIEKPYRSGR 200
    GEWWQKITCK SRDSFVIVGF EPSTVPGHLG RLLLAAREGD EPVYVGGCGT 250
    GWSNKLSREL RKLLEGMATK SPAVDLRRRA AVSVEPVHVA DVEYRAWTDD 300
    GKLRHASFKG IGSGRMTWRL FSGTLVVNSG CTEFTPNAVL ESCRLTFVKR 350
    FATRGGDNTP KIYQ 364
    Length:364
    Mass (Da):40,580
    Last modified:December 1, 2001 - v1
    Checksum:i363B325568190592
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL591985 Genomic DNA. Translation: CAC49610.1.
    PIRiB95993.
    RefSeqiNP_437750.1. NC_003078.1.

    Genome annotation databases

    EnsemblBacteriaiCAC49610; CAC49610; SM_b20912.
    GeneIDi1237542.
    KEGGisme:SM_b20912.
    PATRICi23638824. VBISinMel96828_6132.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL591985 Genomic DNA. Translation: CAC49610.1 .
    PIRi B95993.
    RefSeqi NP_437750.1. NC_003078.1.

    3D structure databases

    ProteinModelPortali Q92UC4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 266834.SM_b20912.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAC49610 ; CAC49610 ; SM_b20912 .
    GeneIDi 1237542.
    KEGGi sme:SM_b20912.
    PATRICi 23638824. VBISinMel96828_6132.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi HARWVEP.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci SMEL266834:GJF6-4644-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The complete sequence of the 1,683-kb pSymB megaplasmid from the N2-fixing endosymbiont Sinorhizobium meliloti."
      Finan T.M., Weidner S., Wong K., Buhrmester J., Chain P., Vorhoelter F.J., Hernandez-Lucas I., Becker A., Cowie A., Gouzy J., Golding B., Puehler A.
      Proc. Natl. Acad. Sci. U.S.A. 98:9889-9894(2001) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 1021Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 1021Imported.

    Entry informationi

    Entry nameiQ92UC4_RHIME
    AccessioniPrimary (citable) accession number: Q92UC4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 1, 2001
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 75 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, PlasmidImported, Reference proteomeImported

    External Data

    Dasty 3