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Q92UC4 (Q92UC4_RHIME) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 74. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=6.5.1.1 EMBL CAC49610.1
Gene names
ORF Names:SM_b20912 EMBL CAC49610.1
Encoded onPlasmid pSymB Ref.1 EMBL CAC49610.1
OrganismRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) [Complete proteome] [HAMAP] EMBL CAC49610.1
Taxonomic identifier266834 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium

Protein attributes

Sequence length364 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CAC49610.1
   Technical termComplete proteome
Plasmid EMBL CAC49610.1
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q92UC4 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 363B325568190592

FASTA36440,580
        10         20         30         40         50         60 
MARASSKKPR DTPPLDPMPA RIDPCLASLV DRPPKGPDWA FEVKWDGYRI AVHIEPGRVR 

        70         80         90        100        110        120 
ILTRGGYDWT ERFPTIVDDA RRLAVKTAIL DGEAVVLDDK GRSDFGMLQR ALGRLPSAVE 

       130        140        150        160        170        180 
AGAIVFYAFD LLYLDGHDLR RLPLRERRRL LEPLVAAREG AVRLSEELQA DGDEFFRVAC 

       190        200        210        220        230        240 
AHGLEGIIAK HIEKPYRSGR GEWWQKITCK SRDSFVIVGF EPSTVPGHLG RLLLAAREGD 

       250        260        270        280        290        300 
EPVYVGGCGT GWSNKLSREL RKLLEGMATK SPAVDLRRRA AVSVEPVHVA DVEYRAWTDD 

       310        320        330        340        350        360 
GKLRHASFKG IGSGRMTWRL FSGTLVVNSG CTEFTPNAVL ESCRLTFVKR FATRGGDNTP 


KIYQ 

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Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AL591985 Genomic DNA. Translation: CAC49610.1.
PIRB95993.
RefSeqNP_437750.1. NC_003078.1.

3D structure databases

ProteinModelPortalQ92UC4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING266834.SM_b20912.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAC49610; CAC49610; SM_b20912.
GeneID1237542.
KEGGsme:SM_b20912.
PATRIC23638824. VBISinMel96828_6132.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000222509.
KOK01971.
OMAHARWVEP.
OrthoDBEOG661H49.

Enzyme and pathway databases

BioCycSMEL266834:GJF6-4644-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ92UC4_RHIME
AccessionPrimary (citable) accession number: Q92UC4
Entry history
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: May 14, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)