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Q92UC4

- Q92UC4_RHIME

UniProt

Q92UC4 - Q92UC4_RHIME

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Protein
Submitted name:

Putative ATP-dependent DNA ligase protein

Gene

SM_b20912

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSMEL266834:GJF6-4644-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative ATP-dependent DNA ligase proteinImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:SM_b20912Imported
Encoded oniPlasmid pSymBImported
OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)Imported
Taxonomic identifieri266834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001976: Plasmid pSymB

Interactioni

Protein-protein interaction databases

STRINGi266834.SM_b20912.

Structurei

3D structure databases

ProteinModelPortaliQ92UC4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiHARWVEP.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92UC4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MARASSKKPR DTPPLDPMPA RIDPCLASLV DRPPKGPDWA FEVKWDGYRI
60 70 80 90 100
AVHIEPGRVR ILTRGGYDWT ERFPTIVDDA RRLAVKTAIL DGEAVVLDDK
110 120 130 140 150
GRSDFGMLQR ALGRLPSAVE AGAIVFYAFD LLYLDGHDLR RLPLRERRRL
160 170 180 190 200
LEPLVAAREG AVRLSEELQA DGDEFFRVAC AHGLEGIIAK HIEKPYRSGR
210 220 230 240 250
GEWWQKITCK SRDSFVIVGF EPSTVPGHLG RLLLAAREGD EPVYVGGCGT
260 270 280 290 300
GWSNKLSREL RKLLEGMATK SPAVDLRRRA AVSVEPVHVA DVEYRAWTDD
310 320 330 340 350
GKLRHASFKG IGSGRMTWRL FSGTLVVNSG CTEFTPNAVL ESCRLTFVKR
360
FATRGGDNTP KIYQ
Length:364
Mass (Da):40,580
Last modified:December 1, 2001 - v1
Checksum:i363B325568190592
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL591985 Genomic DNA. Translation: CAC49610.1.
PIRiB95993.
RefSeqiNP_437750.1. NC_003078.1.

Genome annotation databases

EnsemblBacteriaiCAC49610; CAC49610; SM_b20912.
GeneIDi1237542.
KEGGisme:SM_b20912.
PATRICi23638824. VBISinMel96828_6132.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL591985 Genomic DNA. Translation: CAC49610.1 .
PIRi B95993.
RefSeqi NP_437750.1. NC_003078.1.

3D structure databases

ProteinModelPortali Q92UC4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266834.SM_b20912.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAC49610 ; CAC49610 ; SM_b20912 .
GeneIDi 1237542.
KEGGi sme:SM_b20912.
PATRICi 23638824. VBISinMel96828_6132.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi HARWVEP.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci SMEL266834:GJF6-4644-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The complete sequence of the 1,683-kb pSymB megaplasmid from the N2-fixing endosymbiont Sinorhizobium meliloti."
    Finan T.M., Weidner S., Wong K., Buhrmester J., Chain P., Vorhoelter F.J., Hernandez-Lucas I., Becker A., Cowie A., Gouzy J., Golding B., Puehler A.
    Proc. Natl. Acad. Sci. U.S.A. 98:9889-9894(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021Imported.

Entry informationi

Entry nameiQ92UC4_RHIME
AccessioniPrimary (citable) accession number: Q92UC4
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: October 1, 2014
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, PlasmidImported, Reference proteomeImported

External Data

Dasty 3