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Q92M95

- Q92M95_RHIME

UniProt

Q92M95 - Q92M95_RHIME

Protein
Submitted name:

Probable ATP-dependent DNA ligase

Gene

R02743

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 83 (01 Oct 2014)
      Sequence version 1 (01 Dec 2001)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC
    3. DNA primase activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSMEL266834:GJF6-2809-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Probable ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Ordered Locus Names:R02743Imported
    ORF Names:SMc03959Imported
    OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)Imported
    Taxonomic identifieri266834 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
    ProteomesiUP000001976: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi266834.SMc03959.

    Structurei

    3D structure databases

    ProteinModelPortaliQ92M95.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiDWTIRSI.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q92M95-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAARNEPLSE YNRRRDFTRT SEPKGAVARR SGDNRMRFLV QKHAATRLHY    50
    DFRLEWEGVL KSWAVTRGPS LNPEDKRLAV RTEDHPLAYG DFEGTIPKGE 100
    YGGGTVMLWD TGWWEPEDDP SKALKKGKLS FKLHGSRMKG GWALVRMRPR 150
    EGEKRENWLL VKETDDVASD DGESLINENI TSIVTGRTME EIAEGRGEKR 200
    ARVWHSNKSI SANLKAGAIA ENGNAGKRAT RKASGKLPAF KAPQLATLVT 250
    KVPAGDAWLN EAKFDGYRLV CAVGAGTVRC YTRNGLDWTE KFPAIAAALA 300
    ELDCQSALID GEVVALSEGG STFSALQKAL RTGASTRLYA FDLIELDGKD 350
    LSRKPLVERK ERLEALLQTL GATSTVQFSE HVRGNGEHVL SAICKAGQEG 400
    IIAKEADAPY RSGRSRSWLK VKCTKRQEFV IGGYTPSSKK GRAFASLLVG 450
    TFEGGKLIYR GGVGTGFSGK TMEDLAAAFA KRKRDTSPFD SVPRERMRNS 500
    VWLEPDLVAE VDFAEFTADG HVRHGSFEGL REDKEARAVK LETPKPAEAE 550
    PETAKSKSSA RTRKTPPVQG DADVLGIRIS HPDRVLFEGQ GITKIDLARY 600
    YAVVAERMLP FAADHPVSLV RCPQGGERHC FFQKHASDGF PEAIREVPIT 650
    ESSGDTENYM YIHDAKGLVA AVQMGTLEFH IWGSSIDRLE KPDRLVFDLD 700
    PDPSVDFETV KAAALRLRDE LAEIGLKTVP MVTGGKGVHV IVPLRPHAEW 750
    EEAKGFAKAL ARSIAERDPD NFVATMSKAK RKGKIFIDWL RNDRGATAIA 800
    PYSTRARSGG PVATPVGWDE LQGLEAANGF QIPDIIERIE AGTDPWREIG 850
    KISQSLTKKI LNSVE 865
    Length:865
    Mass (Da):95,261
    Last modified:December 1, 2001 - v1
    Checksum:iA1F873AAB0EEAE40
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL591688 Genomic DNA. Translation: CAC47322.1.
    RefSeqiNP_386849.1. NC_003047.1.

    Genome annotation databases

    EnsemblBacteriaiCAC47322; CAC47322; SMc03959.
    GeneIDi1234419.
    KEGGisme:SMc03959.
    PATRICi23635043. VBISinMel96828_4252.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AL591688 Genomic DNA. Translation: CAC47322.1 .
    RefSeqi NP_386849.1. NC_003047.1.

    3D structure databases

    ProteinModelPortali Q92M95.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 266834.SMc03959.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai CAC47322 ; CAC47322 ; SMc03959 .
    GeneIDi 1234419.
    KEGGi sme:SMc03959.
    PATRICi 23635043. VBISinMel96828_4252.

    Phylogenomic databases

    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi DWTIRSI.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci SMEL266834:GJF6-2809-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR002755. DNA_primase_S.
    IPR014144. LigD_PE_domain.
    IPR014145. LigD_pol.
    IPR012340. NA-bd_OB-fold.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF01896. DNA_primase_S. 1 hit.
    PF13298. LigD_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
    TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 1021Imported.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 1021Imported.

    Entry informationi

    Entry nameiQ92M95_RHIME
    AccessioniPrimary (citable) accession number: Q92M95
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 1, 2001
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 83 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3