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Q92M95

- Q92M95_RHIME

UniProt

Q92M95 - Q92M95_RHIME

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Protein
Submitted name:

Probable ATP-dependent DNA ligase

Gene
R02743, SMc03959
Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSMEL266834:GJF6-2809-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:R02743Imported
ORF Names:SMc03959Imported
OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Taxonomic identifieri266834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001976: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266834.SMc03959.

Structurei

3D structure databases

ProteinModelPortaliQ92M95.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000222509.
KOiK01971.
OMAiDWTIRSI.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92M95-1 [UniParc]FASTAAdd to Basket

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MAARNEPLSE YNRRRDFTRT SEPKGAVARR SGDNRMRFLV QKHAATRLHY    50
DFRLEWEGVL KSWAVTRGPS LNPEDKRLAV RTEDHPLAYG DFEGTIPKGE 100
YGGGTVMLWD TGWWEPEDDP SKALKKGKLS FKLHGSRMKG GWALVRMRPR 150
EGEKRENWLL VKETDDVASD DGESLINENI TSIVTGRTME EIAEGRGEKR 200
ARVWHSNKSI SANLKAGAIA ENGNAGKRAT RKASGKLPAF KAPQLATLVT 250
KVPAGDAWLN EAKFDGYRLV CAVGAGTVRC YTRNGLDWTE KFPAIAAALA 300
ELDCQSALID GEVVALSEGG STFSALQKAL RTGASTRLYA FDLIELDGKD 350
LSRKPLVERK ERLEALLQTL GATSTVQFSE HVRGNGEHVL SAICKAGQEG 400
IIAKEADAPY RSGRSRSWLK VKCTKRQEFV IGGYTPSSKK GRAFASLLVG 450
TFEGGKLIYR GGVGTGFSGK TMEDLAAAFA KRKRDTSPFD SVPRERMRNS 500
VWLEPDLVAE VDFAEFTADG HVRHGSFEGL REDKEARAVK LETPKPAEAE 550
PETAKSKSSA RTRKTPPVQG DADVLGIRIS HPDRVLFEGQ GITKIDLARY 600
YAVVAERMLP FAADHPVSLV RCPQGGERHC FFQKHASDGF PEAIREVPIT 650
ESSGDTENYM YIHDAKGLVA AVQMGTLEFH IWGSSIDRLE KPDRLVFDLD 700
PDPSVDFETV KAAALRLRDE LAEIGLKTVP MVTGGKGVHV IVPLRPHAEW 750
EEAKGFAKAL ARSIAERDPD NFVATMSKAK RKGKIFIDWL RNDRGATAIA 800
PYSTRARSGG PVATPVGWDE LQGLEAANGF QIPDIIERIE AGTDPWREIG 850
KISQSLTKKI LNSVE 865
Length:865
Mass (Da):95,261
Last modified:December 1, 2001 - v1
Checksum:iA1F873AAB0EEAE40
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL591688 Genomic DNA. Translation: CAC47322.1.
RefSeqiNP_386849.1. NC_003047.1.

Genome annotation databases

EnsemblBacteriaiCAC47322; CAC47322; SMc03959.
GeneIDi1234419.
KEGGisme:SMc03959.
PATRICi23635043. VBISinMel96828_4252.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL591688 Genomic DNA. Translation: CAC47322.1 .
RefSeqi NP_386849.1. NC_003047.1.

3D structure databases

ProteinModelPortali Q92M95.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266834.SMc03959.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAC47322 ; CAC47322 ; SMc03959 .
GeneIDi 1234419.
KEGGi sme:SMc03959.
PATRICi 23635043. VBISinMel96828_4252.

Phylogenomic databases

HOGENOMi HOG000222509.
KOi K01971.
OMAi DWTIRSI.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci SMEL266834:GJF6-2809-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021.

Entry informationi

Entry nameiQ92M95_RHIME
AccessioniPrimary (citable) accession number: Q92M95
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: May 14, 2014
This is version 82 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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