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Protein
Submitted name:

Complete chromosome

Gene

SMc03177

Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSMEL266834:GJF6-2977-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Complete chromosomeImported (EC:6.5.1.1Imported)
Gene namesi
ORF Names:SMc03177Imported
OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)Imported
Taxonomic identifieri266834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001976 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266834.SMc03177.

Structurei

3D structure databases

ProteinModelPortaliQ92LV8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000036007.
KOiK10747.
OMAiGQPYPFF.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92LV8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAFAELLDR LVLTPQRNAK IRLLVDYFRG APDPSRGYAL AAIAGTLSLN
60 70 80 90 100
TVKPALIRDL LLERMDDVLF HYSYDYVGDL AETVSLAWEP PPDVALQDIP
110 120 130 140 150
LGEVVERLQR AGRSEVRSLV RDFLDRLDTS GRFALLKLAT GGLRIGVSAR
160 170 180 190 200
LAKQALAEMG GKEVSEIETL WHGLEPPYLP LFLWLTGEAE MPVLKTPAVF
210 220 230 240 250
HSVMLATAVG DGDLDGLDPA DFAAEWKWDG IRVQLANVGG ARRLYSRSGD
260 270 280 290 300
EISSAFPEII EAADITGVID GELLVGGTMR SNRATGTFAD LQQRLNRKTV
310 320 330 340 350
SRKLMDEYPA FIRAYDILFS GERDIRPEPF RVRREALSSL IEAASPQHFD
360 370 380 390 400
LSPLVGFSSW KELDELRSSP PDPVIEGVML KRLDSPYMAG RAKGPWFKWK
410 420 430 440 450
RAPFNIDAVL MYAQRGHGKR SSYYSDFTFG VWAEGEDGAS LVPVGKAYFG
460 470 480 490 500
FTDAELEVLD RFVRDNTVER FGPVRAVRAE PDSGFVVEVA FEGLNRSTRH
510 520 530
KSGVAMRFPR IARLRPDKLP RDADRLETLQ AMMGTQR
Length:537
Mass (Da):59,849
Last modified:December 1, 2001 - v1
Checksum:iBD706BE3A0E12AD5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591688 Genomic DNA. Translation: CAC47487.1.
RefSeqiNP_387014.1. NC_003047.1.

Genome annotation databases

EnsemblBacteriaiCAC47487; CAC47487; SMc03177.
GeneIDi1234585.
KEGGisme:SMc03177.
PATRICi23635400. VBISinMel96828_4429.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL591688 Genomic DNA. Translation: CAC47487.1.
RefSeqiNP_387014.1. NC_003047.1.

3D structure databases

ProteinModelPortaliQ92LV8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi266834.SMc03177.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAC47487; CAC47487; SMc03177.
GeneIDi1234585.
KEGGisme:SMc03177.
PATRICi23635400. VBISinMel96828_4429.

Phylogenomic databases

HOGENOMiHOG000036007.
KOiK10747.
OMAiGQPYPFF.
OrthoDBiEOG6Q8HXT.

Enzyme and pathway databases

BioCyciSMEL266834:GJF6-2977-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021Imported.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021Imported.

Entry informationi

Entry nameiQ92LV8_RHIME
AccessioniPrimary (citable) accession number: Q92LV8
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: April 29, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.