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Q92LV8

- Q92LV8_RHIME

UniProt

Q92LV8 - Q92LV8_RHIME

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Protein
Submitted name:

Putative DNA ligase

Gene
R02908, SMc03177
Organism
Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciSMEL266834:GJF6-2977-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative DNA ligaseImported (EC:6.5.1.1Imported)
Gene namesi
Ordered Locus Names:R02908Imported
ORF Names:SMc03177Imported
OrganismiRhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti)
Taxonomic identifieri266834 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeSinorhizobium/Ensifer groupSinorhizobium
ProteomesiUP000001976: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi266834.SMc03177.

Structurei

3D structure databases

ProteinModelPortaliQ92LV8.

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000036007.
KOiK01971.
OMAiRVWLWSR.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92LV8-1 [UniParc]FASTAAdd to Basket

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MKAFAELLDR LVLTPQRNAK IRLLVDYFRG APDPSRGYAL AAIAGTLSLN    50
TVKPALIRDL LLERMDDVLF HYSYDYVGDL AETVSLAWEP PPDVALQDIP 100
LGEVVERLQR AGRSEVRSLV RDFLDRLDTS GRFALLKLAT GGLRIGVSAR 150
LAKQALAEMG GKEVSEIETL WHGLEPPYLP LFLWLTGEAE MPVLKTPAVF 200
HSVMLATAVG DGDLDGLDPA DFAAEWKWDG IRVQLANVGG ARRLYSRSGD 250
EISSAFPEII EAADITGVID GELLVGGTMR SNRATGTFAD LQQRLNRKTV 300
SRKLMDEYPA FIRAYDILFS GERDIRPEPF RVRREALSSL IEAASPQHFD 350
LSPLVGFSSW KELDELRSSP PDPVIEGVML KRLDSPYMAG RAKGPWFKWK 400
RAPFNIDAVL MYAQRGHGKR SSYYSDFTFG VWAEGEDGAS LVPVGKAYFG 450
FTDAELEVLD RFVRDNTVER FGPVRAVRAE PDSGFVVEVA FEGLNRSTRH 500
KSGVAMRFPR IARLRPDKLP RDADRLETLQ AMMGTQR 537
Length:537
Mass (Da):59,849
Last modified:December 1, 2001 - v1
Checksum:iBD706BE3A0E12AD5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL591688 Genomic DNA. Translation: CAC47487.1.
RefSeqiNP_387014.1. NC_003047.1.

Genome annotation databases

EnsemblBacteriaiCAC47487; CAC47487; SMc03177.
GeneIDi1234585.
KEGGisme:SMc03177.
PATRICi23635400. VBISinMel96828_4429.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AL591688 Genomic DNA. Translation: CAC47487.1 .
RefSeqi NP_387014.1. NC_003047.1.

3D structure databases

ProteinModelPortali Q92LV8.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 266834.SMc03177.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAC47487 ; CAC47487 ; SMc03177 .
GeneIDi 1234585.
KEGGi sme:SMc03177.
PATRICi 23635400. VBISinMel96828_4429.

Phylogenomic databases

HOGENOMi HOG000036007.
KOi K01971.
OMAi RVWLWSR.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci SMEL266834:GJF6-2977-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 1021.

Entry informationi

Entry nameiQ92LV8_RHIME
AccessioniPrimary (citable) accession number: Q92LV8
Entry historyi
Integrated into UniProtKB/TrEMBL: December 1, 2001
Last sequence update: December 1, 2001
Last modified: May 14, 2014
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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