Q92LV8 (Q92LV8_RHIME) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative DNA ligase EMBL CAC47487.1
EC=6.5.1.1 EMBL CAC47487.1

Gene names

Ordered Locus Names:	R02908
ORF Names:	SMc03177 EMBL CAC47487.1

Organism

Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti) [Complete proteome] [HAMAP]

Taxonomic identifier

266834 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Sinorhizobium/Ensifer group › Sinorhizobium › Rhizobium meliloti

Protein attributes

Sequence length	537 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL CAC47487.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q92LV8 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: BD706BE3A0E12AD5	FASTA	537	59,849
	10 20 30 40 50 60 MKAFAELLDR LVLTPQRNAK IRLLVDYFRG APDPSRGYAL AAIAGTLSLN TVKPALIRDL 70 80 90 100 110 120 LLERMDDVLF HYSYDYVGDL AETVSLAWEP PPDVALQDIP LGEVVERLQR AGRSEVRSLV 130 140 150 160 170 180 RDFLDRLDTS GRFALLKLAT GGLRIGVSAR LAKQALAEMG GKEVSEIETL WHGLEPPYLP 190 200 210 220 230 240 LFLWLTGEAE MPVLKTPAVF HSVMLATAVG DGDLDGLDPA DFAAEWKWDG IRVQLANVGG 250 260 270 280 290 300 ARRLYSRSGD EISSAFPEII EAADITGVID GELLVGGTMR SNRATGTFAD LQQRLNRKTV 310 320 330 340 350 360 SRKLMDEYPA FIRAYDILFS GERDIRPEPF RVRREALSSL IEAASPQHFD LSPLVGFSSW 370 380 390 400 410 420 KELDELRSSP PDPVIEGVML KRLDSPYMAG RAKGPWFKWK RAPFNIDAVL MYAQRGHGKR 430 440 450 460 470 480 SSYYSDFTFG VWAEGEDGAS LVPVGKAYFG FTDAELEVLD RFVRDNTVER FGPVRAVRAE 490 500 510 520 530 PDSGFVVEVA FEGLNRSTRH KSGVAMRFPR IARLRPDKLP RDADRLETLQ AMMGTQR

References

[1]

"Analysis of the chromosome sequence of the legume symbiont Sinorhizobium meliloti strain 1021." Capela D., Barloy-Hubler F., Gouzy J., Bothe G., Ampe F., Batut J., Boistard P., Becker A., Boutry M., Cadieu E., Dreano S., Gloux S., Godrie T., Goffeau A., Kahn D., Kiss E., Lelaure V., Masuy D. , Pohl T., Portetelle D., Puehler A., Purnelle B., Ramsperger U., Renard C., Thebault P., Vandenbol M., Weidner S., Galibert F. Proc. Natl. Acad. Sci. U.S.A. 98:9877-9882(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 1021.

[2]

"The composite genome of the legume symbiont Sinorhizobium meliloti." Galibert F., Finan T.M., Long S.R., Puehler A., Abola P., Ampe F., Barloy-Hubler F., Barnett M.J., Becker A., Boistard P., Bothe G., Boutry M., Bowser L., Buhrmester J., Cadieu E., Capela D., Chain P., Cowie A. , Davis R.W., Dreano S., Federspiel N.A., Fisher R.F., Gloux S., Godrie T., Goffeau A., Golding B., Gouzy J., Gurjal M., Hernandez-Lucas I., Hong A., Huizar L., Hyman R.W., Jones T., Kahn D., Kahn M.L., Kalman S., Keating D.H., Kiss E., Komp C., Lelaure V., Masuy D., Palm C., Peck M.C., Pohl T.M., Portetelle D., Purnelle B., Ramsperger U., Surzycki R., Thebault P., Vandenbol M., Vorhoelter F.J., Weidner S., Wells D.H., Wong K., Yeh K.-C., Batut J. Science 293:668-672(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 1021.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AL591688 Genomic DNA. Translation: CAC47487.1.
RefSeq	NP_387014.1. NC_003047.1.
3D structure databases
ProteinModelPortal	Q92LV8.
ModBase	Search...
Protein-protein interaction databases
STRING	266834.SMc03177.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAC47487; CAC47487; SMc03177.
GeneID	1234585.
KEGG	sme:SMc03177.
PATRIC	23635400. VBISinMel96828_4429.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000036007.
KO	K01971.
OMA	AYDLLEW.
ProtClustDB	PRK09247.
Enzyme and pathway databases
BioCyc	SMEL266834:GJF6-2977-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR04120. DNA_lig_bact. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q92LV8_RHIME

Accession

Primary (citable) accession number: Q92LV8

Entry history

Integrated into UniProtKB/TrEMBL:	December 1, 2001
Last sequence update:	December 1, 2001
Last modified:	May 1, 2013
This is version 68 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)