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Q92JM5 (SCO21_RICCN) Reviewed, UniProtKB/Swiss-Prot

Last modified November 13, 2013. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
SCO2-like protein RC0042
Gene names
Ordered Locus Names:RC0042
OrganismRickettsia conorii (strain ATCC VR-613 / Malish 7) [Complete proteome] [HAMAP]
Taxonomic identifier272944 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length199 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the SCO1/2 family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 199199SCO2-like protein RC0042
PRO_0000173877

Sequences

Sequence LengthMass (Da)Tools
Q92JM5 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 80CACB0D4FD0FCB4

FASTA19923,101
        10         20         30         40         50         60 
MRNNKNQMYI IKIFIALAMI TGIIFLCLLY SSLTPSKLKI GVKTSNMDDS PKIKFTLIDQ 

        70         80         90        100        110        120 
EGKKFDSTHL QGHLSLIYFG TTYSLYDNQT LKRVEDIIKI LKKENILVQV VFITLDSEHD 

       130        140        150        160        170        180 
TSEVLKKYLE KIDDNFIGLT GRVEDIEQLA DQFKVFFYTS KIFDVKTNKY ELQHSNFVYL 

       190 
ISSQGKFLKH YYLGLPKNG 

« Hide

References

[1]"Mechanisms of evolution in Rickettsia conorii and R. prowazekii."
Ogata H., Audic S., Renesto-Audiffren P., Fournier P.-E., Barbe V., Samson D., Roux V., Cossart P., Weissenbach J., Claverie J.-M., Raoult D.
Science 293:2093-2098(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-613 / Malish 7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE006914 Genomic DNA. Translation: AAL02580.1.
PIRB97705.
RefSeqNP_359679.1. NC_003103.1.

3D structure databases

ProteinModelPortalQ92JM5.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272944.RC0042.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL02580; AAL02580; RC0042.
GeneID928623.
KEGGrco:RC0042.
PATRIC17887176. VBIRicCon45613_0052.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1999.
HOGENOMHOG000258139.
KOK07152.
OMAIKIFIAL.
OrthoDBEOG6S26DB.
ProtClustDBCLSK870711.

Family and domain databases

Gene3D3.40.30.10. 1 hit.
InterProIPR003782. SCO1/SenC.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PANTHERPTHR12151. PTHR12151. 1 hit.
PfamPF02630. SCO1-SenC. 1 hit.
[Graphical view]
SUPFAMSSF52833. SSF52833. 1 hit.
ProtoNetSearch...

Entry information

Entry nameSCO21_RICCN
AccessionPrimary (citable) accession number: Q92JM5
Entry history
Integrated into UniProtKB/Swiss-Prot: May 2, 2002
Last sequence update: December 1, 2001
Last modified: November 13, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia conorii

(strain Malish 7): entries and gene names