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Protein

SCO2-like protein RC0042

Gene

RC0042

Organism
Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
SCO2-like protein RC0042
Gene namesi
Ordered Locus Names:RC0042
OrganismiRickettsia conorii (strain ATCC VR-613 / Malish 7)
Taxonomic identifieri272944 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000000816 Componenti: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 199199SCO2-like protein RC0042PRO_0000173877Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi272944.RC0042.

Structurei

3D structure databases

ProteinModelPortaliQ92JM5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the SCO1/2 family.Curated

Phylogenomic databases

eggNOGiCOG1999.
HOGENOMiHOG000258139.
KOiK07152.
OMAiKFTLIDQ.
OrthoDBiEOG6S26DB.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR003782. SCO1/SenC.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PANTHERiPTHR12151. PTHR12151. 1 hit.
PfamiPF02630. SCO1-SenC. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.

Sequencei

Sequence statusi: Complete.

Q92JM5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNNKNQMYI IKIFIALAMI TGIIFLCLLY SSLTPSKLKI GVKTSNMDDS
60 70 80 90 100
PKIKFTLIDQ EGKKFDSTHL QGHLSLIYFG TTYSLYDNQT LKRVEDIIKI
110 120 130 140 150
LKKENILVQV VFITLDSEHD TSEVLKKYLE KIDDNFIGLT GRVEDIEQLA
160 170 180 190
DQFKVFFYTS KIFDVKTNKY ELQHSNFVYL ISSQGKFLKH YYLGLPKNG
Length:199
Mass (Da):23,101
Last modified:December 1, 2001 - v1
Checksum:i80CACB0D4FD0FCB4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL02580.1.
PIRiB97705.
RefSeqiNP_359679.1. NC_003103.1.

Genome annotation databases

EnsemblBacteriaiAAL02580; AAL02580; RC0042.
KEGGirco:RC0042.
PATRICi17887176. VBIRicCon45613_0052.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL02580.1.
PIRiB97705.
RefSeqiNP_359679.1. NC_003103.1.

3D structure databases

ProteinModelPortaliQ92JM5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272944.RC0042.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL02580; AAL02580; RC0042.
KEGGirco:RC0042.
PATRICi17887176. VBIRicCon45613_0052.

Phylogenomic databases

eggNOGiCOG1999.
HOGENOMiHOG000258139.
KOiK07152.
OMAiKFTLIDQ.
OrthoDBiEOG6S26DB.

Family and domain databases

Gene3Di3.40.30.10. 1 hit.
InterProiIPR003782. SCO1/SenC.
IPR012336. Thioredoxin-like_fold.
[Graphical view]
PANTHERiPTHR12151. PTHR12151. 1 hit.
PfamiPF02630. SCO1-SenC. 1 hit.
[Graphical view]
SUPFAMiSSF52833. SSF52833. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-613 / Malish 7.

Entry informationi

Entry nameiSCO21_RICCN
AccessioniPrimary (citable) accession number: Q92JM5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 2, 2002
Last sequence update: December 1, 2001
Last modified: April 1, 2015
This is version 62 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia conorii
    (strain Malish 7): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.