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Reviewed, UniProtKB/Swiss-Prot Q92JM4 (Y043_RICCN)

Last modified November 3, 2009. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    UPF0301 protein RC0043
Gene names
Ordered Locus Names: RC0043
OrganismRickettsia conorii [Complete proteome] [HAMAP]
Taxonomic identifier781 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length189 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Sequence similarities

Belongs to the UPF0301 (algH) family.

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 189189UPF0301 protein RC0043 HAMAP MF_00758
PRO_0000214342

Sequences

Sequence LengthMass (Da)Tools
Q92JM4-1 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: D9C08BA10A22A40A

FASTA18921,366
        10         20         30         40         50         60 
MGDKIFHNLS GKTLVATPHV ITKGIYHKSL IYMLSHTEEG AIGLIFNRLV NHIDLKSFFK 

        70         80         90        100        110        120 
IKNDEITTPV MVPIYLGGPV EHEKGFFLHS SDYNKNLLLD FHNDLAVSSN LEISEDIAFG 

       130        140        150        160        170        180 
KGPKNSLFIV GYTAWKPGQL EEELETNLWL VMDCNKEFIF ADNPESKWHN ALKHLGIDEI 


HFSSQIGNA 

« Hide

References

[1]"Mechanisms of evolution in Rickettsia conorii and R. prowazekii."
Ogata H., Audic S., Renesto-Audiffren P., Fournier P.-E., Barbe V., Samson D., Roux V., Cossart P., Weissenbach J., Claverie J.-M., Raoult D.
Science 293:2093-2098(2001) [PubMed: 11557893] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-613 / Malish 7.

Cross-references

Sequence databases

AE006914 Genomic DNA. Translation: AAL02581.1.
PIRC97705.
RefSeqNP_359680.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID928622.
GenomeReviewsGene locus RC0043 in contig AE006914_GR.
KEGGrco:RC0043.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ92JM4.
OMAEKNLWLV

Enzyme and pathway databases

BioCycRCON272944:RC0043-MON.

Family and domain databases

HAMAPMF_00758.
[Tree]
InterProIPR003774. DUF179.
[Graphical view]
PfamPF02622. DUF179. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameY043_RICCN
AccessionPrimary (citable) accession number: Q92JM4
Entry history
Integrated into UniProtKB/Swiss-Prot: April 26, 2004
Last sequence update: December 1, 2001
Last modified: November 3, 2009
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Rickettsia conorii

(strain Malish 7): entries and gene names

SIMILARITY comments

Index of protein domains and families

Uncharacterized protein families (UPF)

List of uncharacterized protein family (UPF) entries

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents