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Reviewed, UniProtKB/Swiss-Prot Q92JK2 (RS18_RICCN)

Last modified December 15, 2009. Version 41. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    30S ribosomal protein S18
Gene names
Name: rpsR
Ordered Locus Names: RC0065
OrganismRickettsia conorii [Complete proteome] [HAMAP]
Taxonomic identifier781 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length95 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

General annotation (Comments)

Function

Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit By similarity.

Subunit structure

Part of the 30S ribosomal subunit. Forms a tight heterodimer with protein S6 By similarity.

Sequence similarities

Belongs to the ribosomal protein S18P family.

Ontologies

Keywords
   LigandRNA-binding
rRNA-binding
   Molecular functionRibonucleoprotein
Ribosomal protein
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processtranslation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentribosome

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functionrRNA binding

Inferred from electronic annotation. Source: HAMAP

structural constituent of ribosome

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 959530S ribosomal protein S18 HAMAP MF_00270
PRO_0000111217

Sequences

Sequence LengthMass (Da)Tools
Q92JK2-1 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: 79B4808F06397E54

FASTA9510,607
        10         20         30         40         50         60 
MLKSNNASET AAHKVGDKTA KKVFFRRRKG CPLSVPNAPV IDYKNPELLI KFVSEGGRML 

        70         80         90 
PSRITNVCAK KQRKLNNAIK IARILALLPF VFQAK 

« Hide

References

[1]"Mechanisms of evolution in Rickettsia conorii and R. prowazekii."
Ogata H., Audic S., Renesto-Audiffren P., Fournier P.-E., Barbe V., Samson D., Roux V., Cossart P., Weissenbach J., Claverie J.-M., Raoult D.
Science 293:2093-2098(2001) [PubMed: 11557893] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-613 / Malish 7.

Cross-references

Sequence databases

AE006914 Genomic DNA. Translation: AAL02603.1.
PIRA97708.
RefSeqNP_359702.1.

3D structure databases

ModBaseSearch...

Genome annotation databases

GeneID928596.
GenomeReviewsGene locus RC0065 in contig AE006914_GR.
KEGGrco:RC0065.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAYRRRKSC.

Enzyme and pathway databases

BioCycRCON272944:RC0065-MON.

Family and domain databases

HAMAPMF_00270.
[Tree]
InterProIPR001648. Ribosomal_S18.
IPR018275. Ribosomal_S18_CS.
[Graphical view]
Gene3DG3DSA:4.10.640.10. Ribosomal_S18. 1 hit.
PANTHERPTHR13479. Ribosomal_S18. 1 hit.
PfamPF01084. Ribosomal_S18. 1 hit.
[Graphical view]
PRINTSPR00974. RIBOSOMALS18.
ProDomPD002239. Ribosomal_S18. 1 hit.
[Graphical view] [Entries sharing at least one domain]
PROSITEPS00057. RIBOSOMAL_S18. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRS18_RICCN
AccessionPrimary (citable) accession number: Q92JK2
Entry history
Integrated into UniProtKB/Swiss-Prot: January 31, 2002
Last sequence update: December 1, 2001
Last modified: December 15, 2009
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

Relevant documents

Ribosomal proteins

Ribosomal proteins families and list of entries

Rickettsia conorii

(strain Malish 7): entries and gene names

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents