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Protein

Probable ABC transporter permease protein RC0129

Gene

RC0129

Organism
Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Could be part of an ABC transporter complex.By similarity

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Probable ABC transporter permease protein RC0129
Gene namesi
Ordered Locus Names:RC0129
OrganismiRickettsia conorii (strain ATCC VR-613 / Malish 7)
Taxonomic identifieri272944 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000000816 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei13 – 3523HelicalSequence AnalysisAdd
BLAST
Transmembranei49 – 6921HelicalSequence AnalysisAdd
BLAST
Transmembranei148 – 16821HelicalSequence AnalysisAdd
BLAST
Transmembranei195 – 21521HelicalSequence AnalysisAdd
BLAST
Transmembranei237 – 25721HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 259259Probable ABC transporter permease protein RC0129PRO_0000272622Add
BLAST

Family & Domainsi

Sequence similaritiesi

Belongs to the MlaE permease family.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiCOG0767.
HOGENOMiHOG000255132.
KOiK02066.
OMAiLMEAGPG.
OrthoDBiEOG6RJV8Q.

Family and domain databases

InterProiIPR003453. ABC_MlaE_Proteobac.
IPR030802. Permease_MalE-type.
[Graphical view]
PANTHERiPTHR30188. PTHR30188. 1 hit.
PfamiPF02405. Permease. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00056. TIGR00056. 1 hit.

Sequencei

Sequence statusi: Complete.

Q92JD8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLFNIANSVG KRTVKFAQSV GSFSLFSFAA VSSIIRPPLY LSLIIRQLLF
60 70 80 90 100
IGFHSLPVVA MTTFFSGAVL ALQSYIGFSR FSAESSIATV VVLSLTRELG
110 120 130 140 150
PVLAGLMVAG RVGASIAAEI ATMRVTEQID ALYTLSTDPI KYLVFPRVIT
160 170 180 190 200
AIITMPCLVL IGDIIGVMGG YLVGVYKLDF NSAAYLTSTF QYLEPIDVIS
210 220 230 240 250
GLVKAGVFGF IISIISCYSG YYSGKGAKGV GRATTSAVVN SSILILISNY

LITELFFKV
Length:259
Mass (Da):27,685
Last modified:December 1, 2001 - v1
Checksum:i7E88792DBF5EC0E4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL02667.1.
PIRiA97716.
RefSeqiNP_359766.1. NC_003103.1.
WP_004996740.1. NC_003103.1.

Genome annotation databases

EnsemblBacteriaiAAL02667; AAL02667; RC0129.
GeneIDi928066.
KEGGirco:RC0129.
PATRICi17887377. VBIRicCon45613_0151.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL02667.1.
PIRiA97716.
RefSeqiNP_359766.1. NC_003103.1.
WP_004996740.1. NC_003103.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL02667; AAL02667; RC0129.
GeneIDi928066.
KEGGirco:RC0129.
PATRICi17887377. VBIRicCon45613_0151.

Phylogenomic databases

eggNOGiCOG0767.
HOGENOMiHOG000255132.
KOiK02066.
OMAiLMEAGPG.
OrthoDBiEOG6RJV8Q.

Family and domain databases

InterProiIPR003453. ABC_MlaE_Proteobac.
IPR030802. Permease_MalE-type.
[Graphical view]
PANTHERiPTHR30188. PTHR30188. 1 hit.
PfamiPF02405. Permease. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00056. TIGR00056. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-613 / Malish 7.

Entry informationi

Entry nameiY129_RICCN
AccessioniPrimary (citable) accession number: Q92JD8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: December 1, 2001
Last modified: June 24, 2015
This is version 73 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Rickettsia conorii
    (strain Malish 7): entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.