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Protein

50S ribosomal protein L31

Gene

rpmE

Organism
Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Binds the 23S rRNA.By similarity

GO - Molecular functioni

  1. rRNA binding Source: UniProtKB-KW
  2. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L31
Gene namesi
Name:rpmE
Ordered Locus Names:RC0137
OrganismiRickettsia conorii (strain ATCC VR-613 / Malish 7)
Taxonomic identifieri272944 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
ProteomesiUP000000816 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. ribosome Source: UniProtKB-KW
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 787850S ribosomal protein L31PRO_0000173154Add
BLAST

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.By similarity

Protein-protein interaction databases

STRINGi272944.RC0137.

Structurei

3D structure databases

ProteinModelPortaliQ92JD0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0254.
HOGENOMiHOG000284895.
KOiK02909.
OMAiYRTHPAW.
OrthoDBiEOG61GGCP.

Family and domain databases

InterProiIPR002150. Ribosomal_L31.
[Graphical view]
PfamiPF01197. Ribosomal_L31. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00105. L31. 1 hit.
PROSITEiPS01143. RIBOSOMAL_L31. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q92JD0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSSIHPEYK KFLIKVGSDV FETMSTHPTG EILMDVDFRK HPAWNKDSGN
60 70
VVNQSNKSVS DFNKRFSGLS FGSKKEAS
Length:78
Mass (Da):8,781
Last modified:December 1, 2001 - v1
Checksum:i36E0EE921C9CE95A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL02675.1.
PIRiA97717.
RefSeqiNP_359774.1. NC_003103.1.

Genome annotation databases

EnsemblBacteriaiAAL02675; AAL02675; RC0137.
KEGGirco:RC0137.
PATRICi17887395. VBIRicCon45613_0160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE006914 Genomic DNA. Translation: AAL02675.1.
PIRiA97717.
RefSeqiNP_359774.1. NC_003103.1.

3D structure databases

ProteinModelPortaliQ92JD0.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi272944.RC0137.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAL02675; AAL02675; RC0137.
KEGGirco:RC0137.
PATRICi17887395. VBIRicCon45613_0160.

Phylogenomic databases

eggNOGiCOG0254.
HOGENOMiHOG000284895.
KOiK02909.
OMAiYRTHPAW.
OrthoDBiEOG61GGCP.

Family and domain databases

InterProiIPR002150. Ribosomal_L31.
[Graphical view]
PfamiPF01197. Ribosomal_L31. 1 hit.
[Graphical view]
TIGRFAMsiTIGR00105. L31. 1 hit.
PROSITEiPS01143. RIBOSOMAL_L31. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC VR-613 / Malish 7.

Entry informationi

Entry nameiRL31_RICCN
AccessioniPrimary (citable) accession number: Q92JD0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 31, 2002
Last sequence update: December 1, 2001
Last modified: April 1, 2015
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. Rickettsia conorii
    (strain Malish 7): entries and gene names
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.