Q92JC3 (Y144_RICCN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein RC0144

Gene names

Ordered Locus Names:

RC0144

Organism

Rickettsia conorii (strain ATCC VR-613 / Malish 7) [Complete proteome] [HAMAP]

Taxonomic identifier

272944 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group

Protein attributes

Sequence length	966 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Subcellular location	Cell membrane; Multi-pass membrane protein Potential.
Sequence similarities	Belongs to the trbL/virB6 family.

Ontologies

Keywords
Cellular component	Cell membrane Membrane
Domain	Signal Transmembrane Transmembrane helix
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	protein secretion by the type IV secretion system Inferred from electronic annotation. Source: InterPro
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: UniProtKB-SubCell
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 24	24	Potential
	Chain	25 – 966	942	Uncharacterized protein RC0144		PRO_0000269213
Regions
	Transmembrane	601 – 621	21	Helical; Potential
	Transmembrane	711 – 731	21	Helical; Potential
	Transmembrane	743 – 763	21	Helical; Potential
	Transmembrane	785 – 805	21	Helical; Potential
	Transmembrane	822 – 842	21	Helical; Potential
	Transmembrane	855 – 875	21	Helical; Potential

Sequences

	Sequence		Length	Mass (Da)
	Q92JC3 [UniParc]. Last modified December 1, 2001. Version 1. Checksum: 034AF3B5C485EEDC	FASTA	966	107,279
	10 20 30 40 50 60 MQGNLLKVLG VLAIVATLVC FIFAALGMIG AVKVGDSCYM RYASDGQGGA DSIIGTITLN 70 80 90 100 110 120 ANANYVNTAK MLSDGTTLLV PDPTRYGEWL NTQVLVENSQ PVNLQVVGQV SLCLAYIPKD 130 140 150 160 170 180 NLQRTGAGSN LDDNGQMIPI PRINDANNPP VSLIMDAKNN EWRNIAELYA NDRVLVSVSP 190 200 210 220 230 240 NFANTDATVK DAFKGAEVTQ DCSENKTTYN PICGKYSVYS GEYVNACELK EKYWNCEVTW 250 260 270 280 290 300 RCPTWHEQIG CDWGALGCVA SCKKIPECTT KCMAWVNITR PAPENYLDDG SFTFSWSDNT 310 320 330 340 350 360 GKLFIDYSAL QCSYNANIPP VDKCPDRVRD RRIKDKDYIG GVHCTSGICS DGDFQKNRRF 370 380 390 400 410 420 WYTADGKGGK GPTGLIYQMN DAGSVSQALP SKLEFAKFVA DTDQPPDYKG KDGKYLYKVI 430 440 450 460 470 480 YNIPFNSNIA KSYLQYRLWS PTSQDSSKNT GGYVLNIKQT KCYRENGNSF NDTFDDRGRV 490 500 510 520 530 540 QYIIVKPSEN PNTSGKTYSP QGISVDSEGK YSFNANEAGY IWMKILNDPG NNLRDYKDSE 550 560 570 580 590 600 GSYKVHFSTS LKVGSFTIKV MNPLLQLFKT KVQGAATSIF KNMVCYKAND SSSCTNFFTY 610 620 630 640 650 660 IKAILILYVM TYGAMFLLGF AKINQKELVI RIAKIGVVSG LMNGNTFEFF NNYLFDAITN 670 680 690 700 710 720 FSDSIIANMS GYSLFTSTNT ISNPFMFLDA VMSKIFFSQT FIAQLLALLS LGLSGIIYFI 730 740 750 760 770 780 ITFIAVCIVI ITALRAVAVY IMAFMATCIL IGIAPLFISF LLFDFTRYLF DNWVRFTIRY 790 800 810 820 830 840 MMEPVVMMAG IIVLTQLFTI YLDFVLGYSV CWKCALPIKI PFIGTILPIA LLNVPIFCIN 850 860 870 880 890 900 WFAPWGMDYM SGMMGVNMQN IVALVIIAYG MYGYVEFSGR IVVKLTSAVG PSATEIGGKM 910 920 930 940 950 960 SHDAGQKVLS SIGMDDKTRQ GITGRAEARL KQRNKTLDQA EKNRKNTQKE GGEKTNEEPP KPETPK

References

[1]

"Mechanisms of evolution in Rickettsia conorii and R. prowazekii." Ogata H., Audic S., Renesto-Audiffren P., Fournier P.-E., Barbe V., Samson D., Roux V., Cossart P., Weissenbach J., Claverie J.-M., Raoult D. Science 293:2093-2098(2001) [PubMed: 11557893] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC VR-613 / Malish 7.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE006914 Genomic DNA. Translation: AAL02682.1.
PIR	H97717.
RefSeq	NP_359781.1. NC_003103.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	928050.
GenomeReviews	Gene locus RC0144 in contig AE006914_GR.
KEGG	rco:RC0144.
NMPDR	fig|272944.1.peg.144.
PATRIC	17887413. VBIRicCon45613_0168.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	YLDFVLG.
ProtClustDB	CLSK870746.
Enzyme and pathway databases
BioCyc	RCON272944:RC0144-MONOMER.
Family and domain databases
InterPro	IPR007688. Conjugal_tfr_TrbL/VirB6. [Graphical view]
KO	K03201.
Pfam	PF04610. TrbL. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y144_RICCN

Accession

Primary (citable) accession number: Q92JC3

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 12, 2006
Last sequence update:	December 1, 2001
Last modified:	January 25, 2012
This is version 48 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program