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Q92JB3

- SECF_RICCN

UniProt

Q92JB3 - SECF_RICCN

Protein

Protein translocase subunit SecF

Gene

secF

Organism
Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 68 (01 Oct 2014)
      Sequence version 1 (01 Dec 2001)
      Previous versions | rss
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    Functioni

    Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.UniRule annotation

    GO - Molecular functioni

    1. P-P-bond-hydrolysis-driven protein transmembrane transporter activity Source: InterPro

    GO - Biological processi

    1. intracellular protein transmembrane transport Source: UniProtKB-HAMAP
    2. protein targeting Source: UniProtKB-HAMAP
    3. protein transport by the Sec complex Source: UniProtKB-HAMAP

    Keywords - Biological processi

    Protein transport, Translocation, Transport

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Protein translocase subunit SecF
    Gene namesi
    Name:secFUniRule annotation
    Ordered Locus Names:RC0154
    OrganismiRickettsia conorii (strain ATCC VR-613 / Malish 7)
    Taxonomic identifieri272944 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000000816: Chromosome

    Subcellular locationi

    Cell inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. intracellular Source: GOC
    3. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 308308Protein translocase subunit SecFPRO_0000272638Add
    BLAST

    Interactioni

    Subunit structurei

    Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC.UniRule annotation

    Protein-protein interaction databases

    STRINGi272944.RC0154.

    Structurei

    3D structure databases

    ProteinModelPortaliQ92JB3.
    ModBaseiSearch...
    MobiDBiSearch...

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei28 – 4821HelicalUniRule annotationAdd
    BLAST
    Transmembranei140 – 16021HelicalUniRule annotationAdd
    BLAST
    Transmembranei164 – 18421HelicalUniRule annotationAdd
    BLAST
    Transmembranei194 – 21421HelicalUniRule annotationAdd
    BLAST
    Transmembranei246 – 26621HelicalUniRule annotationAdd
    BLAST
    Transmembranei272 – 29221HelicalUniRule annotationAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the SecD/SecF family. SecF subfamily.UniRule annotation

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG0341.
    HOGENOMiHOG000245916.
    KOiK03074.
    OMAiMKTINFM.
    OrthoDBiEOG676Z5R.

    Family and domain databases

    HAMAPiMF_01464_B. SecF_B.
    InterProiIPR022813. SecD/SecF_arch_bac.
    IPR022645. SecD/SecF_bac.
    IPR022646. SecD/SecF_CS.
    IPR005665. SecF_bac.
    IPR000731. SSD.
    [Graphical view]
    PfamiPF07549. Sec_GG. 1 hit.
    PF02355. SecD_SecF. 1 hit.
    [Graphical view]
    PRINTSiPR01755. SECFTRNLCASE.
    TIGRFAMsiTIGR00916. 2A0604s01. 1 hit.
    TIGR00966. 3a0501s07. 1 hit.
    PROSITEiPS50156. SSD. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q92JB3-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQIYPLRLLP NKIDFDFMNF KKVSYTFSII LSLISFIWIG IYKFNFGIDF    50
    AGGIVIEVRL DQAPDLPKMR GVLGKLGIGE VVLQNFGSER DLSIRFGSSS 100
    EENLMKNIEL IKGFLQSNFP YKFEYRKVDF VGPQVGRQLI EAGAMAMLFS 150
    FLAIMVYIWV RFEWYFGLGI LIALVHDVIL ALGFMSMTKL DFNLSTIAAV 200
    LTIIGYSVND SVVIYDRIRE NLRKYHKKNI TEIINLSINE TLSRTILTVI 250
    TTLLANLALI LFGGEAIRSF SVLVFFGIIA GTYSSIFISA PILTMFVNRK 300
    FNKKVIER 308
    Length:308
    Mass (Da):35,033
    Last modified:December 1, 2001 - v1
    Checksum:iACC302C07B48D720
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006914 Genomic DNA. Translation: AAL02692.1.
    PIRiB97719.
    RefSeqiNP_359791.1. NC_003103.1.

    Genome annotation databases

    EnsemblBacteriaiAAL02692; AAL02692; RC0154.
    GeneIDi928040.
    KEGGirco:RC0154.
    PATRICi17887441. VBIRicCon45613_0182.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006914 Genomic DNA. Translation: AAL02692.1 .
    PIRi B97719.
    RefSeqi NP_359791.1. NC_003103.1.

    3D structure databases

    ProteinModelPortali Q92JB3.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272944.RC0154.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAL02692 ; AAL02692 ; RC0154 .
    GeneIDi 928040.
    KEGGi rco:RC0154.
    PATRICi 17887441. VBIRicCon45613_0182.

    Phylogenomic databases

    eggNOGi COG0341.
    HOGENOMi HOG000245916.
    KOi K03074.
    OMAi MKTINFM.
    OrthoDBi EOG676Z5R.

    Family and domain databases

    HAMAPi MF_01464_B. SecF_B.
    InterProi IPR022813. SecD/SecF_arch_bac.
    IPR022645. SecD/SecF_bac.
    IPR022646. SecD/SecF_CS.
    IPR005665. SecF_bac.
    IPR000731. SSD.
    [Graphical view ]
    Pfami PF07549. Sec_GG. 1 hit.
    PF02355. SecD_SecF. 1 hit.
    [Graphical view ]
    PRINTSi PR01755. SECFTRNLCASE.
    TIGRFAMsi TIGR00916. 2A0604s01. 1 hit.
    TIGR00966. 3a0501s07. 1 hit.
    PROSITEi PS50156. SSD. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-613 / Malish 7.

    Entry informationi

    Entry nameiSECF_RICCN
    AccessioniPrimary (citable) accession number: Q92JB3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 23, 2007
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 68 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia conorii
      (strain Malish 7): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3