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Q92JB3 (SECF_RICCN) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Protein translocase subunit SecF
Gene names
Name:secF
Ordered Locus Names:RC0154
OrganismRickettsia conorii (strain ATCC VR-613 / Malish 7) [Complete proteome] [HAMAP]
Taxonomic identifier272944 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length308 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA By similarity. HAMAP-Rule MF_01464

Subunit structure

Forms a complex with SecD. Part of the essential Sec protein translocation apparatus which comprises SecA, SecYEG and auxiliary proteins SecDF-YajC and YidC By similarity.

Subcellular location

Cell inner membrane; Multi-pass membrane protein By similarity HAMAP-Rule MF_01464.

Sequence similarities

Belongs to the SecD/SecF family. SecF subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 308308Protein translocase subunit SecF HAMAP-Rule MF_01464
PRO_0000272638

Regions

Transmembrane28 – 4821Helical; Potential
Transmembrane140 – 16021Helical; Potential
Transmembrane164 – 18421Helical; Potential
Transmembrane194 – 21421Helical; Potential
Transmembrane246 – 26621Helical; Potential
Transmembrane272 – 29221Helical; Potential

Sequences

Sequence LengthMass (Da)Tools
Q92JB3 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: ACC302C07B48D720

FASTA30835,033
        10         20         30         40         50         60 
MQIYPLRLLP NKIDFDFMNF KKVSYTFSII LSLISFIWIG IYKFNFGIDF AGGIVIEVRL 

        70         80         90        100        110        120 
DQAPDLPKMR GVLGKLGIGE VVLQNFGSER DLSIRFGSSS EENLMKNIEL IKGFLQSNFP 

       130        140        150        160        170        180 
YKFEYRKVDF VGPQVGRQLI EAGAMAMLFS FLAIMVYIWV RFEWYFGLGI LIALVHDVIL 

       190        200        210        220        230        240 
ALGFMSMTKL DFNLSTIAAV LTIIGYSVND SVVIYDRIRE NLRKYHKKNI TEIINLSINE 

       250        260        270        280        290        300 
TLSRTILTVI TTLLANLALI LFGGEAIRSF SVLVFFGIIA GTYSSIFISA PILTMFVNRK 


FNKKVIER 

« Hide

References

[1]"Mechanisms of evolution in Rickettsia conorii and R. prowazekii."
Ogata H., Audic S., Renesto-Audiffren P., Fournier P.-E., Barbe V., Samson D., Roux V., Cossart P., Weissenbach J., Claverie J.-M., Raoult D.
Science 293:2093-2098(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-613 / Malish 7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE006914 Genomic DNA. Translation: AAL02692.1.
PIRB97719.
RefSeqNP_359791.1. NC_003103.1.

3D structure databases

ProteinModelPortalQ92JB3.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272944.RC0154.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL02692; AAL02692; RC0154.
GeneID928040.
KEGGrco:RC0154.
PATRIC17887441. VBIRicCon45613_0182.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0341.
HOGENOMHOG000245916.
KOK03074.
OMAMWLGVKR.
OrthoDBEOG676Z5R.
ProtClustDBPRK13022.

Family and domain databases

HAMAPMF_01464_B. SecF_B.
InterProIPR022813. SecD/SecF_arch_bac.
IPR022645. SecD/SecF_bac.
IPR022646. SecD/SecF_CS.
IPR005665. SecF_bac.
IPR000731. SSD.
[Graphical view]
PfamPF07549. Sec_GG. 1 hit.
PF02355. SecD_SecF. 1 hit.
[Graphical view]
PRINTSPR01755. SECFTRNLCASE.
TIGRFAMsTIGR00916. 2A0604s01. 1 hit.
TIGR00966. 3a0501s07. 1 hit.
PROSITEPS50156. SSD. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSECF_RICCN
AccessionPrimary (citable) accession number: Q92JB3
Entry history
Integrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: December 1, 2001
Last modified: February 19, 2014
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia conorii

(strain Malish 7): entries and gene names