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Q92I14 (RBFA_RICCN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ribosome-binding factor A
Gene names
Name:rbfA
Ordered Locus Names:RC0606
OrganismRickettsia conorii (strain ATCC VR-613 / Malish 7) [Complete proteome] [HAMAP]
Taxonomic identifier272944 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group

Protein attributes

Sequence length120 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA By similarity. HAMAP-Rule MF_00003

Subcellular location

Cytoplasm Potential HAMAP-Rule MF_00003.

Sequence similarities

Belongs to the RbfA family.

Ontologies

Keywords
   Biological processrRNA processing
   Cellular componentCytoplasm
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processrRNA processing

Inferred from electronic annotation. Source: UniProtKB-HAMAP

   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 120120Ribosome-binding factor A HAMAP-Rule MF_00003
PRO_0000102721

Sequences

Sequence LengthMass (Da)Tools
Q92I14 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: A8D1CD62DD57C0A2

FASTA12013,899
        10         20         30         40         50         60 
MKKLTKTHSH RQQKLASIIN EALIEILRRG KMLDSRLFDC PLTITKVIVT ADLKIANCYF 

        70         80         90        100        110        120 
LPFNTKLTID EIMDALNNSK NAIRNFITNK INMKFSPDIR FHYDHGFDNA IKVAHLLKDL 

« Hide

References

[1]"Mechanisms of evolution in Rickettsia conorii and R. prowazekii."
Ogata H., Audic S., Renesto-Audiffren P., Fournier P.-E., Barbe V., Samson D., Roux V., Cossart P., Weissenbach J., Claverie J.-M., Raoult D.
Science 293:2093-2098(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-613 / Malish 7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AE006914 Genomic DNA. Translation: AAL03144.1.
PIRF97775.
RefSeqNP_360243.1. NC_003103.1.

3D structure databases

ProteinModelPortalQ92I14.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING272944.RC0606.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL03144; AAL03144; RC0606.
GeneID927698.
KEGGrco:RC0606.
PATRIC17888482. VBIRicCon45613_0692.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0858.
HOGENOMHOG000272967.
KOK02834.
OMATNKINMK.
OrthoDBEOG68Q0RP.

Family and domain databases

Gene3D3.30.300.20. 1 hit.
HAMAPMF_00003. RbfA.
InterProIPR015946. KH_dom-like_a/b.
IPR000238. Ribosome-bd_facA.
IPR023799. Ribosome-bd_facA_dom.
IPR020053. Ribosome-bd_factorA_CS.
[Graphical view]
PfamPF02033. RBFA. 1 hit.
[Graphical view]
ProDomPD007327. Rib_bd_factA. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF89919. SSF89919. 1 hit.
TIGRFAMsTIGR00082. rbfA. 1 hit.
PROSITEPS01319. RBFA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameRBFA_RICCN
AccessionPrimary (citable) accession number: Q92I14
Entry history
Integrated into UniProtKB/Swiss-Prot: January 31, 2002
Last sequence update: December 1, 2001
Last modified: May 14, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Rickettsia conorii

(strain Malish 7): entries and gene names