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Q92I14

- RBFA_RICCN

UniProt

Q92I14 - RBFA_RICCN

Protein

Ribosome-binding factor A

Gene

rbfA

Organism
Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.UniRule annotation

    GO - Biological processi

    1. rRNA processing Source: UniProtKB-HAMAP

    Keywords - Biological processi

    rRNA processing

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Ribosome-binding factor AUniRule annotation
    Gene namesi
    Name:rbfAUniRule annotation
    Ordered Locus Names:RC0606
    OrganismiRickettsia conorii (strain ATCC VR-613 / Malish 7)
    Taxonomic identifieri272944 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000000816: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cytoplasm

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 120120Ribosome-binding factor APRO_0000102721Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi272944.RC0606.

    Structurei

    3D structure databases

    ProteinModelPortaliQ92I14.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the RbfA family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0858.
    HOGENOMiHOG000272967.
    KOiK02834.
    OMAiTNKINMK.
    OrthoDBiEOG68Q0RP.

    Family and domain databases

    Gene3Di3.30.300.20. 1 hit.
    HAMAPiMF_00003. RbfA.
    InterProiIPR015946. KH_dom-like_a/b.
    IPR000238. Ribosome-bd_facA.
    IPR023799. Ribosome-bd_facA_dom.
    IPR020053. Ribosome-bd_factorA_CS.
    [Graphical view]
    PfamiPF02033. RBFA. 1 hit.
    [Graphical view]
    ProDomiPD007327. Rib_bd_factA. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    SUPFAMiSSF89919. SSF89919. 1 hit.
    TIGRFAMsiTIGR00082. rbfA. 1 hit.
    PROSITEiPS01319. RBFA. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q92I14-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKKLTKTHSH RQQKLASIIN EALIEILRRG KMLDSRLFDC PLTITKVIVT    50
    ADLKIANCYF LPFNTKLTID EIMDALNNSK NAIRNFITNK INMKFSPDIR 100
    FHYDHGFDNA IKVAHLLKDL 120
    Length:120
    Mass (Da):13,899
    Last modified:December 1, 2001 - v1
    Checksum:iA8D1CD62DD57C0A2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006914 Genomic DNA. Translation: AAL03144.1.
    PIRiF97775.
    RefSeqiNP_360243.1. NC_003103.1.

    Genome annotation databases

    EnsemblBacteriaiAAL03144; AAL03144; RC0606.
    GeneIDi927698.
    KEGGirco:RC0606.
    PATRICi17888482. VBIRicCon45613_0692.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006914 Genomic DNA. Translation: AAL03144.1 .
    PIRi F97775.
    RefSeqi NP_360243.1. NC_003103.1.

    3D structure databases

    ProteinModelPortali Q92I14.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272944.RC0606.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAL03144 ; AAL03144 ; RC0606 .
    GeneIDi 927698.
    KEGGi rco:RC0606.
    PATRICi 17888482. VBIRicCon45613_0692.

    Phylogenomic databases

    eggNOGi COG0858.
    HOGENOMi HOG000272967.
    KOi K02834.
    OMAi TNKINMK.
    OrthoDBi EOG68Q0RP.

    Family and domain databases

    Gene3Di 3.30.300.20. 1 hit.
    HAMAPi MF_00003. RbfA.
    InterProi IPR015946. KH_dom-like_a/b.
    IPR000238. Ribosome-bd_facA.
    IPR023799. Ribosome-bd_facA_dom.
    IPR020053. Ribosome-bd_factorA_CS.
    [Graphical view ]
    Pfami PF02033. RBFA. 1 hit.
    [Graphical view ]
    ProDomi PD007327. Rib_bd_factA. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    SUPFAMi SSF89919. SSF89919. 1 hit.
    TIGRFAMsi TIGR00082. rbfA. 1 hit.
    PROSITEi PS01319. RBFA. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-613 / Malish 7.

    Entry informationi

    Entry nameiRBFA_RICCN
    AccessioniPrimary (citable) accession number: Q92I14
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: January 31, 2002
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 69 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia conorii
      (strain Malish 7): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3