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Q92HJ3 (SODF_RICCN) Reviewed, UniProtKB/Swiss-Prot

Last modified May 1, 2013. Version 67. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Superoxide dismutase [Mn/Fe]
EC=1.15.1.1
Gene names
Name:sodB
Ordered Locus Names:RC0778
OrganismRickettsia conorii (strain ATCC VR-613 / Malish 7) [Complete proteome] [HAMAP]
Taxonomic identifier272944 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Alphaproteobacteria › Rickettsiales › Rickettsiaceae › Rickettsieae › Rickettsia › spotted fever group ›

Protein attributes

Sequence length209 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.

Catalytic activity

2 superoxide + 2 H+ = O2 + H2O2.

Cofactor

Binds 1 manganese or iron ion per subunit By similarity.

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family.

Ontologies

Keywords
   LigandIron
Manganese
Metal-binding
   Molecular functionOxidoreductase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processsuperoxide metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionmetal ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

superoxide dismutase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 209209Superoxide dismutase [Mn/Fe]
PRO_0000159998

Sites

Metal binding381Manganese or iron By similarity
Metal binding901Manganese or iron By similarity
Metal binding1721Manganese or iron By similarity
Metal binding1761Manganese or iron By similarity

Sequences

Sequence LengthMass (Da)Tools
Q92HJ3 [UniParc].

Last modified December 1, 2001. Version 1.
Checksum: DC0FF9CDB954D74F

FASTA20924,648
        10         20         30         40         50         60 
MTYCNKSNQT SYPFILPDLP YEKESFKPHF TLETFDYHHG KHHNTYVQNL NNLLKDKEEL 

        70         80         90        100        110        120 
QKKDLEEIIE WSSQNSNAAI FNNAAQIWNH TFFWHSIKPQ GGGKPSGKIL EQINKDFGSF 

       130        140        150        160        170        180 
EEFCEQFKQE AVGQFGSGWA WLIYHDNRLQ IIKTANAGTP IAHGMKPLLA CDVWEHAYYI 

       190        200 
DYRNKRPDYV DIFIKHMINW KFVEDNLIK

« Hide

References

[1]"Mechanisms of evolution in Rickettsia conorii and R. prowazekii."
Ogata H., Audic S., Renesto-Audiffren P., Fournier P.-E., Barbe V., Samson D., Roux V., Cossart P., Weissenbach J., Claverie J.-M., Raoult D.
Science 293:2093-2098(2001) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC VR-613 / Malish 7.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		AE006914 Genomic DNA. Translation: AAL03316.1.
PIRB97797.
RefSeqNP_360415.1. NC_003103.1.

3D structure databases

ProteinModelPortalQ92HJ3.
SMRQ92HJ3. Positions 14-207.
ModBaseSearch...

Protein-protein interaction databases

STRING272944.RC0778.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAL03316; AAL03316; RC0778.
GeneID927465.
KEGGrco:RC0778.
PATRIC17888878. VBIRicCon45613_0882.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0605.
HOGENOMHOG000013584.
KOK04564.
OMANCMAPNG.
ProtClustDBCLSK870979.

Family and domain databases

InterProIPR001189. Mn/Fe_SOD.
IPR019833. Mn/Fe_SOD_BS.
IPR019832. Mn/Fe_SOD_C.
IPR019831. Mn/Fe_SOD_N.
[Graphical view]
PANTHERPTHR11404. PTHR11404. 1 hit.
PfamPF02777. Sod_Fe_C. 1 hit.
PF00081. Sod_Fe_N. 1 hit.
[Graphical view]
PIRSFPIRSF000349. SODismutase. 1 hit.
PRINTSPR01703. MNSODISMTASE.
SUPFAMSSF46609. SODismutase. 1 hit.
SSF54719. SODismutase. 1 hit.
PROSITEPS00088. SOD_MN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameSODF_RICCN
AccessionPrimary (citable) accession number: Q92HJ3
Entry history
Integrated into UniProtKB/Swiss-Prot: March 27, 2002
Last sequence update: December 1, 2001
Last modified: May 1, 2013
This is version 67 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

Rickettsia conorii

(strain Malish 7): entries and gene names

SIMILARITY comments

Index of protein domains and families

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