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Q92HJ3

- SODF_RICCN

UniProt

Q92HJ3 - SODF_RICCN

Protein

Superoxide dismutase [Mn/Fe]

Gene

sodB

Organism
Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 72 (01 Oct 2014)
      Sequence version 1 (01 Dec 2001)
      Previous versions | rss
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    Functioni

    Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.

    Catalytic activityi

    2 superoxide + 2 H+ = O2 + H2O2.

    Cofactori

    Binds 1 manganese or iron ion per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi38 – 381Manganese or ironBy similarity
    Metal bindingi90 – 901Manganese or ironBy similarity
    Metal bindingi172 – 1721Manganese or ironBy similarity
    Metal bindingi176 – 1761Manganese or ironBy similarity

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. superoxide dismutase activity Source: UniProtKB-EC

    Keywords - Molecular functioni

    Oxidoreductase

    Keywords - Ligandi

    Iron, Manganese, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Superoxide dismutase [Mn/Fe] (EC:1.15.1.1)
    Gene namesi
    Name:sodB
    Ordered Locus Names:RC0778
    OrganismiRickettsia conorii (strain ATCC VR-613 / Malish 7)
    Taxonomic identifieri272944 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRickettsialesRickettsiaceaeRickettsieaeRickettsiaspotted fever group
    ProteomesiUP000000816: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 209209Superoxide dismutase [Mn/Fe]PRO_0000159998Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi272944.RC0778.

    Structurei

    3D structure databases

    ProteinModelPortaliQ92HJ3.
    SMRiQ92HJ3. Positions 14-207.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0605.
    HOGENOMiHOG000013584.
    KOiK04564.
    OMAiWTWLVKG.
    OrthoDBiEOG63NMNT.

    Family and domain databases

    InterProiIPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view]
    PANTHERiPTHR11404. PTHR11404. 1 hit.
    PfamiPF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000349. SODismutase. 1 hit.
    PRINTSiPR01703. MNSODISMTASE.
    SUPFAMiSSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEiPS00088. SOD_MN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q92HJ3-1 [UniParc]FASTAAdd to Basket

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    MTYCNKSNQT SYPFILPDLP YEKESFKPHF TLETFDYHHG KHHNTYVQNL    50
    NNLLKDKEEL QKKDLEEIIE WSSQNSNAAI FNNAAQIWNH TFFWHSIKPQ 100
    GGGKPSGKIL EQINKDFGSF EEFCEQFKQE AVGQFGSGWA WLIYHDNRLQ 150
    IIKTANAGTP IAHGMKPLLA CDVWEHAYYI DYRNKRPDYV DIFIKHMINW 200
    KFVEDNLIK 209
    Length:209
    Mass (Da):24,648
    Last modified:December 1, 2001 - v1
    Checksum:iDC0FF9CDB954D74F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006914 Genomic DNA. Translation: AAL03316.1.
    PIRiB97797.
    RefSeqiNP_360415.1. NC_003103.1.

    Genome annotation databases

    EnsemblBacteriaiAAL03316; AAL03316; RC0778.
    GeneIDi927465.
    KEGGirco:RC0778.
    PATRICi17888878. VBIRicCon45613_0882.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AE006914 Genomic DNA. Translation: AAL03316.1 .
    PIRi B97797.
    RefSeqi NP_360415.1. NC_003103.1.

    3D structure databases

    ProteinModelPortali Q92HJ3.
    SMRi Q92HJ3. Positions 14-207.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 272944.RC0778.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAL03316 ; AAL03316 ; RC0778 .
    GeneIDi 927465.
    KEGGi rco:RC0778.
    PATRICi 17888878. VBIRicCon45613_0882.

    Phylogenomic databases

    eggNOGi COG0605.
    HOGENOMi HOG000013584.
    KOi K04564.
    OMAi WTWLVKG.
    OrthoDBi EOG63NMNT.

    Family and domain databases

    InterProi IPR001189. Mn/Fe_SOD.
    IPR019833. Mn/Fe_SOD_BS.
    IPR019832. Mn/Fe_SOD_C.
    IPR019831. Mn/Fe_SOD_N.
    [Graphical view ]
    PANTHERi PTHR11404. PTHR11404. 1 hit.
    Pfami PF02777. Sod_Fe_C. 1 hit.
    PF00081. Sod_Fe_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000349. SODismutase. 1 hit.
    PRINTSi PR01703. MNSODISMTASE.
    SUPFAMi SSF46609. SSF46609. 1 hit.
    SSF54719. SSF54719. 1 hit.
    PROSITEi PS00088. SOD_MN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC VR-613 / Malish 7.

    Entry informationi

    Entry nameiSODF_RICCN
    AccessioniPrimary (citable) accession number: Q92HJ3
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: March 27, 2002
    Last sequence update: December 1, 2001
    Last modified: October 1, 2014
    This is version 72 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome

    Documents

    1. Rickettsia conorii
      (strain Malish 7): entries and gene names
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3